RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 KRT79Q5XKE5 535 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 LRRC43Q8N309 656 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 CCDC51Q96ER9 411 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 CASD1Q96PB1 797 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 MRPL9Q9BYD2 267 aaKnown RBP24.82■■□□□ 1.56
SF1-220ENST00000626028 NSUN3Q9H649 340 aaKnown RBP24.82■■□□□ 1.56
SF1-220ENST00000626028 PRDM6Q9NQX0 595 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 BMP2KQ9NSY1 1161 aaPredicted RBP24.82■■□□□ 1.56
SF1-220ENST00000626028 FAM105AQ9NUU6 356 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 VCANP13611 3396 aa24.82■■□□□ 1.56
SF1-220ENST00000626028 ARHGEF35A5YM69 484 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 USO1O60763 962 aaKnown RBP24.81■■□□□ 1.56
SF1-220ENST00000626028 ERLIN2O94905 339 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 CYP11B2P19099 503 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 GATMP50440 423 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 CNNM3Q8NE01 707 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 PGBD4Q96DM1 585 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 MINDY3Q9H8M7 445 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 RNF19AQ9NV58 838 aa24.81■■□□□ 1.56
SF1-220ENST00000626028 TYW1Q9NV66 732 aaKnown RBP24.81■■□□□ 1.56
SF1-220ENST00000626028 GRM6O15303 877 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 ATF7P17544 494 aaPredicted RBP24.8■■□□□ 1.56
SF1-220ENST00000626028 GLRA2P23416 452 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 CAPSQ13938 189 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 PADI6Q6TGC4 694 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 KLHL23Q8NBE8 558 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 SNX29Q8TEQ0 813 aa24.8■■□□□ 1.56
SF1-220ENST00000626028 POLR3FQ9H1D9 316 aaPredicted RBP24.8■■□□□ 1.56
SF1-220ENST00000626028 TDRD15B5MCY1 1934 aaKnown RBP24.79■■□□□ 1.56
SF1-220ENST00000626028 K7ELQ4 463 aaPredicted RBP24.79■■□□□ 1.56
SF1-220ENST00000626028 DLL1O00548 723 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 SLC26A4O43511 780 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 ITGB1P05556 798 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 IBSPP21815 317 aaPredicted RBP24.79■■□□□ 1.56
SF1-220ENST00000626028 HOXA11P31270 313 aaPredicted RBP24.79■■□□□ 1.56
SF1-220ENST00000626028 PPM1AP35813 382 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 COL19A1Q14993 1142 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 CLLU1OSQ5K130 101 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 SPOUT1Q5T280 376 aaKnown RBP24.79■■□□□ 1.56
SF1-220ENST00000626028 SPPL3Q8TCT6 385 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 ASAP3Q8TDY4 903 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 PPP2R3CQ969Q6 453 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 SNX21Q969T3 373 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 CWH43Q9H720 699 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 KIAA1024Q9UPX6 916 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 LZTS1Q9Y250 596 aa24.79■■□□□ 1.56
SF1-220ENST00000626028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.78■■□□□ 1.56
SF1-220ENST00000626028 INO80B-WBP1J3KQ70 363 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 PPP2R5AQ15172 486 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 IL17AQ16552 155 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 PDE12Q6L8Q7 609 aaKnown RBP24.78■■□□□ 1.56
SF1-220ENST00000626028 NOTUMQ6P988 496 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 GLB1LQ6UWU2 654 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 MRPL10Q7Z7H8 261 aaKnown RBP24.78■■□□□ 1.56
SF1-220ENST00000626028 COLGALT1Q8NBJ5 622 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 RNF169Q8NCN4 708 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 PRIMPOLQ96LW4 560 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 AK8Q96MA6 479 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 NT5C3AQ9H0P0 336 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 DNM3Q9UQ16 869 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 PCDHB2Q9Y5E7 798 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 TTC28Q96AY4 2481 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 CNTNAP2Q9UHC6 1331 aa24.78■■□□□ 1.56
SF1-220ENST00000626028 TCF20Q9UGU0 1960 aaKnown RBP24.78■■□□□ 1.56
SF1-220ENST00000626028 MBTD1Q05BQ5 628 aa24.77■■□□□ 1.56
SF1-220ENST00000626028 HYIQ5T013 277 aa24.77■■□□□ 1.56
SF1-220ENST00000626028 CDCA2Q69YH5 1023 aaPredicted RBP24.77■■□□□ 1.56
SF1-220ENST00000626028 KIFAP3Q92845 792 aa24.77■■□□□ 1.56
SF1-220ENST00000626028 COL25A1Q9BXS0 654 aaPredicted RBP24.77■■□□□ 1.56
SF1-220ENST00000626028 C2orf40Q9H1Z8 148 aa24.77■■□□□ 1.56
SF1-220ENST00000626028 ALG13Q9NP73 1137 aaKnown RBP24.77■■□□□ 1.56
SF1-220ENST00000626028 UBN1Q9NPG3 1134 aa24.77■■□□□ 1.56
SF1-220ENST00000626028 DDX19AQ9NUU7 478 aaKnown RBP24.77■■□□□ 1.56
SF1-220ENST00000626028 MYH15Q9Y2K3 1946 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 A0A087WWV3 80 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 TSPAN1O60635 241 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 EYA4O95677 639 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 NAMPTP43490 491 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 PLCB3Q01970 1234 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 ECM1Q16610 540 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 LRRC55Q6ZSA7 311 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 BHMT2Q9H2M3 363 aa24.76■■□□□ 1.55
SF1-220ENST00000626028 PRMT7Q9NVM4 692 aaPredicted RBP24.76■■□□□ 1.55
SF1-220ENST00000626028 FSD2A1L4K1 749 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 FGF18O76093 207 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 PDIA4P13667 645 aaKnown RBP24.75■■□□□ 1.55
SF1-220ENST00000626028 NCLP19338 710 aaKnown RBP24.75■■□□□ 1.55
SF1-220ENST00000626028 CAMK1Q14012 370 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 FAM187BQ17R55 369 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 PPP4R3CPQ6ZMV5 832 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 ZBTB8OSQ8IWT0 167 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 HELQQ8TDG4 1101 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 POF1BQ8WVV4 589 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 PABPC5Q96DU9 382 aaKnown RBP24.75■■□□□ 1.55
SF1-220ENST00000626028 ZNF558Q96NG5 402 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 MMTAG2Q9BU76 263 aaKnown RBP24.75■■□□□ 1.55
SF1-220ENST00000626028 TIPINQ9BVW5 301 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 UBE2ZQ9H832 354 aaPredicted RBP24.75■■□□□ 1.55
SF1-220ENST00000626028 KANSL3Q9P2N6 904 aa24.75■■□□□ 1.55
SF1-220ENST00000626028 PUF60Q9UHX1 559 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms