RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
LINC00963-220ENST00000625171 ARID2Q68CP9 1835 aa12.92□□□□□ -0.34
LINC00963-220ENST00000625171 ZMYM2Q9UBW7 1377 aa12.92□□□□□ -0.34
LINC00963-220ENST00000625171 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-220ENST00000625171 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 K7ENM7 598 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 ADCY3O60266 1144 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 MSCO60682 206 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 NR3C1P04150 777 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 TPM2P07951 284 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 GARTP22102 1010 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 NR2F2P24468 414 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 GSDMDP57764 484 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-220ENST00000625171 KCNA1Q09470 495 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-220ENST00000625171 NELFCDQ8IXH7 590 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 PSPC1Q8WXF1 523 aaKnown RBP12.91□□□□□ -0.34
LINC00963-220ENST00000625171 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
LINC00963-220ENST00000625171 ERGIC2Q96RQ1 377 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 POLD4Q9HCU8 107 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
LINC00963-220ENST00000625171 DENND3A2RUS2 1198 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 N4BP3O15049 544 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 SLC16A4O15374 487 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 ZEB2O60315 1214 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 RPLP2P05387 115 aaKnown RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 KLRC1P26715 233 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 TMOD1P28289 359 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 CNGA1P29973 690 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 PURAQ00577 322 aaKnown RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 TBX2Q13207 712 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 TFDP1Q14186 410 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 FSCN1Q16658 493 aaKnown RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 FAM187BQ17R55 369 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 MIIPQ5JXC2 388 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 MARCH8Q5T0T0 291 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 SPECC1LQ69YQ0 1117 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 CCSAPQ6IQ19 270 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 EFCAB12Q6NXP0 572 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 ZPBP2Q6X784 338 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 SLAIN1Q8ND83 568 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 KLHDC9Q8NEP7 349 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
LINC00963-220ENST00000625171 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
LINC00963-220ENST00000625171 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 MYH11P35749 1972 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SMIM35A0A1B0GVV1 85 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 K7ERI5 159 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 PMM2O15305 246 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 ADAMTS4O75173 837 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 RARBP10826 455 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 MARK3P27448 753 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
LINC00963-220ENST00000625171 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
LINC00963-220ENST00000625171 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 FIGNQ5HY92 759 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 MTHFD1LQ6UB35 978 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 TRMT1LQ7Z2T5 733 aaKnown RBP12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 ASAP3Q8TDY4 903 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SH3TC2Q8TF17 1288 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 FZD8Q9H461 694 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
LINC00963-220ENST00000625171 SUCLA2Q9P2R7 463 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-220ENST00000625171 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
LINC00963-220ENST00000625171 AKAP3O75969 853 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 GNAT1P11488 350 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 PTGS1P23219 599 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
LINC00963-220ENST00000625171 PSEN2P49810 448 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 PTENP60484 403 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 CAPSQ13938 189 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 TRIM14Q14142 442 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 MFSD10Q14728 455 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 GRIK4Q16099 956 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 NME8Q8N427 588 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 RAET1EQ8TD07 263 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms