RNA–Protein interactions for RNA: ENST00000622961.3

CR381653.1-201, humanhuman

TSL 3 BASIC

Gene CR381653.1, Length 812 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR381653.1-201ENST00000622961 ST3GAL1Q11201 340 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 ANKRD1Q15327 319 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 ME3Q16798 604 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 JPH2Q9BR39 696 aaPredicted RBP16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 BMP2KQ9NSY1 1161 aaPredicted RBP16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 COL4A3BPQ9Y5P4 624 aa16.62■□□□□ 0.25
CR381653.1-201ENST00000622961 P4HBP07237 508 aaKnown RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 KRT2P35908 639 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 RFC5P40937 340 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 POLGP54098 1239 aaPredicted RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 BCAR1P56945 870 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 CBX2Q14781 532 aaPredicted RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 EMC2Q15006 297 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 EPHA7Q15375 998 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 NCAPH2Q6IBW4 605 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 CEP170P1Q96L14 293 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 MINDY3Q9H8M7 445 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 PPME1Q9Y570 386 aa16.61■□□□□ 0.25
CR381653.1-201ENST00000622961 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 JAK2O60674 1132 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 YWHABP31946 246 aaKnown RBP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 RAB27AP51159 221 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 ANKRD54Q6NXT1 300 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 LLGL2Q6P1M3 1020 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 PSPC1Q8WXF1 523 aaKnown RBP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 RSPH1Q8WYR4 309 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 WASF1Q92558 559 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 TMEM143Q96AN5 459 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 PHF7Q9BWX1 381 aaPredicted RBP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 INO80BQ9C086 356 aaPredicted RBP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 S1PR5Q9H228 398 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 TBC1D13Q9NVG8 400 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 PUF60Q9UHX1 559 aaKnown RBP16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 CDH22Q9UJ99 828 aa16.6■□□□□ 0.25
CR381653.1-201ENST00000622961 C2orf71A6NGG8 1288 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 ZBTB39O15060 712 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 ZNF623O75123 536 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 ZC3H11AO75152 810 aaKnown RBP eCLIP16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 TECP42680 631 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 KRT17Q04695 432 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 LAMTOR4Q0VGL1 99 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 SMC1AQ14683 1233 aaKnown RBP16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 TMC7Q7Z402 723 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 PRPF31Q8WWY3 499 aaKnown RBP16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 VN1R3Q9BXE9 311 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 ZBP1Q9H171 429 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 INPP5FQ9Y2H2 1132 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 HCFC2Q9Y5Z7 792 aa16.59■□□□□ 0.25
CR381653.1-201ENST00000622961 GAS2O43903 313 aaKnown RBP16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 SRGAP2BP0DMP2 458 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 SKIP12755 728 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 FOSBP53539 338 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 GLB1LQ6UWU2 654 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 AGMOQ6ZNB7 445 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 SLFN12Q8IYM2 578 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 MRPL43Q8N983 215 aaKnown RBP16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 TMEM169Q96HH4 297 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 APOL5Q9BWW9 433 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 ZSWIM4Q9H7M6 989 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 DNAJB4Q9UDY4 337 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
CR381653.1-201ENST00000622961 CLASP2O75122 1294 aaKnown RBP16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 OFD1O75665 1012 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 HOXA11P31270 313 aaPredicted RBP16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 SLC11A1P49279 550 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 AUTS2Q8WXX7 1259 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 EDAQ92838 391 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 MTRQ99707 1265 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
CR381653.1-201ENST00000622961 BTBD18B2RXH4 712 aa16.56■□□□□ 0.24
CR381653.1-201ENST00000622961 MARCH6O60337 910 aa16.56■□□□□ 0.24
CR381653.1-201ENST00000622961 SLITRK3O94933 977 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms