RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CCDC85BQ15834 202 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 TMEM132AQ24JP5 1023 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 FOXD4L6Q3SYB3 417 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 FOXD4L3Q6VB84 417 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 CRIPAKQ8N1N5 446 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 KCTD17Q8N5Z5 321 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 PNMA5Q96PV4 448 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 RC3H2Q9HBD1 1191 aaKnown RBP15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 POLD4Q9HCU8 107 aa15.47■□□□□ 0.07
PCDHGC3-208ENST00000622836 SLC26A4O43511 780 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 EOMESO95936 686 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 F13A1P00488 732 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 TXLNAP40222 546 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 NAMPTP43490 491 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 RAB27AP51159 221 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 GRIN1Q05586 938 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 MBTD1Q05BQ5 628 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 LONRF3Q496Y0 759 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 HYIQ5T013 277 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 NFKBIZQ9BYH8 718 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 C2orf40Q9H1Z8 148 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 FAM105AQ9NUU6 356 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 COL4A6Q14031 1691 aa15.46■□□□□ 0.07
PCDHGC3-208ENST00000622836 TSPAN1O60635 241 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 PLA2G4BP0C869 781 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 AXLP30530 894 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 BMPR1AP36894 532 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 GPM6BQ13491 265 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 DHX8Q14562 1220 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 SLC39A14Q15043 492 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 KARSQ15046 597 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 TMEM119Q4V9L6 283 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 SPECC1Q5M775 1068 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 RINT1Q6NUQ1 792 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 NOTUMQ6P988 496 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 BSNDQ8WZ55 320 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 CPB2Q96IY4 423 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 RUSC1Q9BVN2 902 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 TRAIPQ9BWF2 469 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 TRIM6Q9C030 488 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 TMEM117Q9H0C3 514 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 AAASQ9NRG9 546 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 CCDC39Q9UFE4 941 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 FBXO2Q9UK22 296 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 SRPRBQ9Y5M8 271 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 COL6A3P12111 3177 aa15.45■□□□□ 0.06
PCDHGC3-208ENST00000622836 CCDC169A6NNP5 214 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 HIP1RO75146 1068 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 RB1P06400 928 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 PLCG1P19174 1290 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 RAD51AP2Q09MP3 1159 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 DMP1Q13316 513 aaPredicted RBP15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 PKP1Q13835 747 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 SKIV2LQ15477 1246 aaKnown RBP15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 MAPK6Q16659 721 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 PTPROQ16827 1216 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 SYT2Q8N9I0 419 aaPredicted RBP15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 HELQQ8TDG4 1101 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 LPPQ93052 612 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 EPSTI1Q96J88 318 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 CLIC6Q96NY7 704 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 KIFC3Q9BVG8 833 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 TIPINQ9BVW5 301 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 PCDHB2Q9Y5E7 798 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 MTCH2Q9Y6C9 303 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 NLRC5Q86WI3 1866 aa15.44■□□□□ 0.06
PCDHGC3-208ENST00000622836 H3BNC9 293 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 SPTLC2O15270 562 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 B4GALT5O43286 388 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 LPXNO60711 386 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 PRKCBP05771 671 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 ARF4P18085 180 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 HOXA11P31270 313 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 NASPP49321 788 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 EFNA5P52803 228 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 PEX3P56589 373 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 CDCA2Q69YH5 1023 aaPredicted RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 GLB1LQ6UWU2 654 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 C1orf186Q6ZWK4 172 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 ZNF598Q86UK7 904 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 LRRC43Q8N309 656 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 SYMPKQ92797 1274 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 CCDC51Q96ER9 411 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 CASD1Q96PB1 797 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 PLVAPQ9BX97 442 aa15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 MRPL9Q9BYD2 267 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-208ENST00000622836 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms