RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 GPC3P51654 580 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 BECN1Q14457 450 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 MTERF2Q49AM1 385 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 ARL6IP4Q66PJ3 421 aaKnown RBP23.5■■□□□ 1.35
PMPCA-212ENST00000622209 EXOC8Q8IYI6 725 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 IGSF22Q8N9C0 903 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 NLRP7Q8WX94 980 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 MSLNLQ96KJ4 702 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 CASD1Q96PB1 797 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 CEP89Q96ST8 783 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 SH2D3AQ9BRG2 576 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 TLR9Q9NR96 1032 aa23.5■■□□□ 1.35
PMPCA-212ENST00000622209 CSDE1O75534 798 aaKnown RBP23.49■■□□□ 1.35
PMPCA-212ENST00000622209 XRCC6P12956 609 aaKnown RBP eCLIP23.49■■□□□ 1.35
PMPCA-212ENST00000622209 DARSP14868 501 aaKnown RBP23.49■■□□□ 1.35
PMPCA-212ENST00000622209 ERVFC1P60507 584 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 UBE3AQ05086 875 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 DRP2Q13474 957 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 LRRC55Q6ZSA7 311 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 ZNF710Q8N1W2 664 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 JPH2Q9BR39 696 aaPredicted RBP23.49■■□□□ 1.35
PMPCA-212ENST00000622209 TMEM117Q9H0C3 514 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 CYP26B1Q9NR63 512 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 RNF19AQ9NV58 838 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 LRWD1Q9UFC0 647 aa23.49■■□□□ 1.35
PMPCA-212ENST00000622209 BARX2Q9UMQ3 279 aaPredicted RBP23.49■■□□□ 1.35
PMPCA-212ENST00000622209 PRR33A8MZF0 331 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 GLP2RO95838 553 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 SPATA31C1P0DKV0 1188 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 LAG3P18627 525 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 MUTP22033 750 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 RPA1P27694 616 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 RBM10P98175 930 aaKnown RBP23.48■■□□□ 1.35
PMPCA-212ENST00000622209 CSPP1Q1MSJ5 1256 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 HAUS3Q68CZ6 603 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 CATSPER3Q86XQ3 398 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 ECHDC2Q86YB7 292 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 ABI1Q8IZP0 508 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 SPRYD3Q8NCJ5 442 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 CEP170P1Q96L14 293 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 ANKEF1Q9NU02 776 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 C5orf42Q9H799 3197 aa23.48■■□□□ 1.35
PMPCA-212ENST00000622209 IGKV6-21A0A0C4DH24 114 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 HOXA2O43364 376 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 MAFO75444 373 aaPredicted RBP23.47■■□□□ 1.35
PMPCA-212ENST00000622209 EYA4O95677 639 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 PBX3P40426 434 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 IL17AQ16552 155 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 PLA2G4FQ68DD2 849 aa23.47■■□□□ 1.35
PMPCA-212ENST00000622209 POP1Q99575 1024 aaKnown RBP23.47■■□□□ 1.35
PMPCA-212ENST00000622209 MED24O75448 989 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 RFC5P40937 340 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 DNM2P50570 870 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 NPEPPSP55786 919 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 SF3A1Q15459 793 aaKnown RBP23.46■■□□□ 1.35
PMPCA-212ENST00000622209 LOXHD1Q8IVV2 1947 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 NACC1Q96RE7 527 aa23.46■■□□□ 1.35
PMPCA-212ENST00000622209 PUF60Q9UHX1 559 aaKnown RBP23.46■■□□□ 1.35
PMPCA-212ENST00000622209 ZBTB39O15060 712 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 CDC42EP1Q00587 391 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 COASYQ13057 564 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 XKR9Q5GH70 373 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 CLLU1OSQ5K130 101 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 PLPP4Q5VZY2 271 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 KCNT2Q6UVM3 1135 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 RNF135Q8IUD6 432 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 SMRP1Q8NCR6 262 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 VN1R2Q8NFZ6 395 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 SLC7A3Q8WY07 619 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 MRPS27Q92552 414 aaKnown RBP23.45■■□□□ 1.34
PMPCA-212ENST00000622209 ZNF558Q96NG5 402 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 GCOM2Q9BZD3 368 aaPredicted RBP23.45■■□□□ 1.34
PMPCA-212ENST00000622209 DHX33Q9H6R0 707 aaKnown RBP23.45■■□□□ 1.34
PMPCA-212ENST00000622209 MUTYHQ9UIF7 546 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 EVPLQ92817 2033 aa23.45■■□□□ 1.34
PMPCA-212ENST00000622209 A0A087WZ62 844 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 A0A0U1RQF3 1178 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 FSCN2O14926 492 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 ZSCAN22P10073 491 aaPredicted RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 CCT6AP40227 531 aaKnown RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 PLCB3Q01970 1234 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 DUSP6Q16828 381 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 KRT79Q5XKE5 535 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 LRRC43Q8N309 656 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 ZNF579Q8NAF0 562 aaKnown RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 HELQQ8TDG4 1101 aa23.44■■□□□ 1.34
PMPCA-212ENST00000622209 FDXACB1Q9BRP7 624 aaPredicted RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 SUCLA2Q9P2R7 463 aaPredicted RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 USP15Q9Y4E8 981 aaPredicted RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 ARIH1Q9Y4X5 557 aaPredicted RBP23.44■■□□□ 1.34
PMPCA-212ENST00000622209 ATG2AQ2TAZ0 1938 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 GAS2O43903 313 aaKnown RBP23.43■■□□□ 1.34
PMPCA-212ENST00000622209 POLGP54098 1239 aaPredicted RBP23.43■■□□□ 1.34
PMPCA-212ENST00000622209 PDE12Q6L8Q7 609 aaKnown RBP23.43■■□□□ 1.34
PMPCA-212ENST00000622209 FAM173BQ6P4H8 233 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 ZNF598Q86UK7 904 aaKnown RBP23.43■■□□□ 1.34
PMPCA-212ENST00000622209 PIGOQ8TEQ8 1089 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 TCF25Q9BQ70 676 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 ENTPD7Q9NQZ7 604 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms