RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PCDHA6Q9UN73 950 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PCDHA4Q9UN74 947 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PCDHA8Q9Y5H6 950 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC162PA2VCL2 907 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 HTR3EA5X5Y0 456 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 RAD51CO43502 376 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 KCNQ2O43526 872 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 CYTH3O43739 400 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 MOCS3O95396 460 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 ERVK-9P63128 1117 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 ACVR2BQ13705 512 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 ITGA9Q13797 1035 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 ARL6IP4Q66PJ3 421 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 MARK2Q7KZI7 788 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 TMC3Q7Z5M5 1100 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 ZC3H18Q86VM9 953 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 SLC44A5Q8NCS7 719 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 LINC00116Q8NCU8 138 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 DEPTORQ8TB45 409 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 MDM1Q8TC05 714 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 LRRC8CQ8TDW0 803 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 DIS3LQ8TF46 1054 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 NAT14Q8WUY8 206 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 SELENOSQ9BQE4 189 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 EIF2AQ9BY44 585 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 STMN4Q9H169 189 aaPredicted RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 DPH5Q9H2P9 285 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 INIPQ9NRY2 104 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 AGPAT5Q9NUQ2 364 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 SMARCAL1Q9NZC9 954 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
TRIM49B-202ENST00000622138 SMIM31A0A1B0GVY4 71 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 H7C1D1 291 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 LGR5O75473 907 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 AGTP01019 485 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 NUDT17P0C025 328 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 EEF1GP26641 437 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 RGS2P41220 211 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DNM2P50570 870 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TFAP4Q01664 338 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 MKRN3Q13064 507 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GRM4Q14833 912 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GRIK5Q16478 980 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 BCL2A1Q16548 175 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SYDE2Q5VT97 1194 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 C3orf62Q6ZUJ4 267 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 NANOGNBQ7Z5D8 188 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SPATA24Q86W54 205 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 MAP7D3Q8IWC1 876 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PPFIBP2Q8ND30 876 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 FAM13CQ8NE31 585 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SETDB2Q96T68 719 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ADAM7Q9H2U9 754 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 MLXIPQ9HAP2 919 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ETNK2Q9NVF9 386 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 MCM9Q9NXL9 1143 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DDX43Q9NXZ2 648 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 MAD2L2Q9UI95 211 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TMEM59LQ9UK28 342 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 R3HDM2Q9Y2K5 976 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SBF2Q86WG5 1849 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 NRAPQ86VF7 1730 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 KDM4FA0A1W2PPD8 638 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TBC1D12O60347 775 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SHBGP04278 402 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GOLGA8HP0CJ92 632 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 VAV1P15498 845 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 PLCG1P19174 1290 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 CALML3P27482 149 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 ADARP55265 1226 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 R3HDM1Q15032 1099 aaKnown RBP8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 INAQ16352 499 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 SBK1Q52WX2 424 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
TRIM49B-202ENST00000622138 GRAMD4Q6IC98 578 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms