RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 PIK3AP1Q6ZUJ8 805 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 ZNF410Q86VK4 478 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 ECHDC2Q86YB7 292 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 NLRP7Q8WX94 980 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 HAS1Q92839 578 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 TNFRSF25Q93038 417 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 ZNF668Q96K58 619 aaPredicted RBP24.71■■□□□ 1.55
SRRT-218ENST00000620394 SCLT1Q96NL6 688 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 CASD1Q96PB1 797 aa24.71■■□□□ 1.55
SRRT-218ENST00000620394 CFAP54Q96N23 3096 aa24.7■■□□□ 1.55
SRRT-218ENST00000620394 LARGE1O95461 756 aa24.7■■□□□ 1.54
SRRT-218ENST00000620394 EARS2Q5JPH6 523 aaKnown RBP24.7■■□□□ 1.54
SRRT-218ENST00000620394 TMC7Q7Z402 723 aa24.7■■□□□ 1.54
SRRT-218ENST00000620394 ZNF598Q86UK7 904 aaKnown RBP24.7■■□□□ 1.54
SRRT-218ENST00000620394 POMKQ9H5K3 350 aa24.7■■□□□ 1.54
SRRT-218ENST00000620394 PPME1Q9Y570 386 aa24.7■■□□□ 1.54
SRRT-218ENST00000620394 HCFC2Q9Y5Z7 792 aa24.7■■□□□ 1.54
SRRT-218ENST00000620394 DENND4AQ7Z401 1863 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 A0A0U1RQF3 1178 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 C2CD4DB7Z1M9 353 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 EIF5BO60841 1220 aaKnown RBP24.69■■□□□ 1.54
SRRT-218ENST00000620394 DTNBO60941 627 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 QARSP47897 775 aaKnown RBP24.69■■□□□ 1.54
SRRT-218ENST00000620394 DNM2P50570 870 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 SPIRE1Q08AE8 756 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 LRRC55Q6ZSA7 311 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 JPH2Q9BR39 696 aaPredicted RBP24.69■■□□□ 1.54
SRRT-218ENST00000620394 SH2D3AQ9BRG2 576 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 TRAIPQ9BWF2 469 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 GCOM2Q9BZD3 368 aaPredicted RBP24.69■■□□□ 1.54
SRRT-218ENST00000620394 ADAM7Q9H2U9 754 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 SPG21Q9NZD8 308 aa24.69■■□□□ 1.54
SRRT-218ENST00000620394 CCNT1O60563 726 aaKnown RBP24.68■■□□□ 1.54
SRRT-218ENST00000620394 DKC1O60832 514 aaKnown RBP eCLIP24.68■■□□□ 1.54
SRRT-218ENST00000620394 BRD1O95696 1058 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 KRT2P35908 639 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 PBX3P40426 434 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 CLLU1OSQ5K130 101 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 PLA2G4FQ68DD2 849 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 POTEDQ86YR6 584 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 NECAB1Q8N987 351 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 NSUN7Q8NE18 718 aaKnown RBP24.68■■□□□ 1.54
SRRT-218ENST00000620394 CYP26B1Q9NR63 512 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 CHST12Q9NRB3 414 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 DACT1Q9NYF0 836 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 WRAP73Q9P2S5 460 aaPredicted RBP24.68■■□□□ 1.54
SRRT-218ENST00000620394 CDH22Q9UJ99 828 aa24.68■■□□□ 1.54
SRRT-218ENST00000620394 ZFHX2Q9C0A1 2572 aaPredicted RBP24.67■■□□□ 1.54
SRRT-218ENST00000620394 MYO10Q9HD67 2058 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 FAM205CA6NFA0 338 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 DDX11L8A8MPP1 907 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 EOMESO95936 686 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 P4HBP07237 508 aaKnown RBP24.67■■□□□ 1.54
SRRT-218ENST00000620394 FGFR4P22455 802 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 SFPQP23246 707 aaKnown RBP eCLIP24.67■■□□□ 1.54
SRRT-218ENST00000620394 NBL1P41271 181 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 MTHFRP42898 656 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 NR5A1Q13285 461 aa24.67■■□□□ 1.54
SRRT-218ENST00000620394 SUCLA2Q9P2R7 463 aaPredicted RBP24.67■■□□□ 1.54
SRRT-218ENST00000620394 MYO15AQ9UKN7 3530 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 A0A087WZ62 844 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 PRR23AA6NEV1 266 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 C2orf71A6NGG8 1288 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 BMS1Q14692 1282 aaKnown RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 EPHA7Q15375 998 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 C4orf19Q8IY42 314 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 SLC39A11Q8N1S5 342 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 TMEM105Q8N8V8 129 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 MRPL43Q8N983 215 aaKnown RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 TDRD5Q8NAT2 981 aaKnown RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 RSPH1Q8WYR4 309 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 FDXACB1Q9BRP7 624 aaPredicted RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 LXNQ9BS40 222 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 MRPL9Q9BYD2 267 aaKnown RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 DHX33Q9H6R0 707 aaKnown RBP24.66■■□□□ 1.54
SRRT-218ENST00000620394 BRMS1Q9HCU9 246 aa24.66■■□□□ 1.54
SRRT-218ENST00000620394 CSDE1O75534 798 aaKnown RBP24.65■■□□□ 1.54
SRRT-218ENST00000620394 ASCL5Q7RTU5 278 aa24.65■■□□□ 1.54
SRRT-218ENST00000620394 RHPN2Q8IUC4 686 aa24.65■■□□□ 1.54
SRRT-218ENST00000620394 SLFN12Q8IYM2 578 aa24.65■■□□□ 1.54
SRRT-218ENST00000620394 INO80BQ9C086 356 aaPredicted RBP24.65■■□□□ 1.54
SRRT-218ENST00000620394 DZANK1Q9NVP4 752 aa24.65■■□□□ 1.54
SRRT-218ENST00000620394 CLASP2O75122 1294 aaKnown RBP24.64■■□□□ 1.54
SRRT-218ENST00000620394 NPEPPSP55786 919 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 ST3GAL1Q11201 340 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 KIAA1841Q6NSI8 718 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 EXOC8Q8IYI6 725 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 ZDHHC14Q8IZN3 488 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 SLC7A3Q8WY07 619 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 IFT122Q9HBG6 1241 aa24.64■■□□□ 1.54
SRRT-218ENST00000620394 RFC5P40937 340 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 PHKA2P46019 1235 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 NEK4P51957 841 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 ASTLQ6HA08 431 aaPredicted RBP24.63■■□□□ 1.53
SRRT-218ENST00000620394 ZNF579Q8NAF0 562 aaKnown RBP24.63■■□□□ 1.53
SRRT-218ENST00000620394 RNF169Q8NCN4 708 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 USTQ9Y2C2 406 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 COL4A3BPQ9Y5P4 624 aa24.63■■□□□ 1.53
SRRT-218ENST00000620394 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
SRRT-218ENST00000620394 JAK2O60674 1132 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms