RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 PPP1R13LQ8WUF5 828 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 SEPT8Q92599 483 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 TNFRSF25Q93038 417 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 WNT8BQ93098 351 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 C8orf76Q96K31 380 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 MSLNLQ96KJ4 702 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 FAM20AQ96MK3 541 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 PCYT2Q99447 389 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 IL21Q9HBE4 155 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 KCNMB3Q9NPA1 279 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 DISC1Q9NRI5 854 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 CD207Q9UJ71 328 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 TELO2Q9Y4R8 837 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
SSX4B-202ENST00000619890 SQORQ9Y6N5 450 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 TET1Q8NFU7 2136 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
SSX4B-202ENST00000619890 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
SSX4B-202ENST00000619890 KDM3AQ9Y4C1 1321 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 LINC01565O15544 149 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 CHMP2AO43633 222 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 SLC37A4O43826 429 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 NEMFO60524 1076 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 CCNT1O60563 726 aaKnown RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 NBNO60934 754 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 BAG4O95429 457 aaKnown RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 LMNAP02545 664 aaKnown RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 OATP04181 439 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 CTSHP09668 335 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 IGBP1P78318 339 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 MRPS6P82932 125 aaKnown RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 HTRA4P83105 476 aaPredicted RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 ZNF200P98182 395 aaPredicted RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 PRKCEQ02156 737 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 PPP2R5CQ13362 524 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 IKBKEQ14164 716 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 MBTPS1Q14703 1052 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 PTPN21Q16825 1174 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 ODR4Q5SWX8 454 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 MARCH8Q5T0T0 291 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 Q6ZNB5 142 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 TSHZ1Q6ZSZ6 1077 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 MIER3Q7Z3K6 550 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 TMEM192Q8IY95 271 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 CKAP2LQ8IYA6 745 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 NME8Q8N427 588 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 TTC13Q8NBP0 860 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 SAMD11Q96NU1 681 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 MTRQ99707 1265 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 IFIH1Q9BYX4 1025 aaKnown RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 FOXP1Q9H334 677 aaPredicted RBP6.79□□□□□ -1.32
SSX4B-202ENST00000619890 GABBR1Q9UBS5 961 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 PPME1Q9Y570 386 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 TRPV2Q9Y5S1 764 aa6.79□□□□□ -1.32
SSX4B-202ENST00000619890 OTOGLQ3ZCN5 2332 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 RBAK-RBAKDNI3L0D1 243 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 MAGEB2O15479 319 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 EDIL3O43854 480 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 MARCH6O60337 910 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 C22orf31O95567 290 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 AMHP03971 560 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 TMOD1P28289 359 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 TRAPPC10P48553 1259 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 MGAT3Q09327 533 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 NR5A1Q13285 461 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 GNL2Q13823 731 aaKnown RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 XKR3Q5GH77 459 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 RUFY4Q6ZNE9 571 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 EXOC8Q8IYI6 725 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 FBXO18Q8NFZ0 1043 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 KCNG4Q8TDN1 519 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 DNAJB3Q8WWF6 145 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 CHAMP1Q96JM3 812 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 RPGRIP1Q96KN7 1286 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 MAP7D2Q96T17 732 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 JPH2Q9BR39 696 aaPredicted RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 PHF7Q9BWX1 381 aaPredicted RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 FTHL17Q9BXU8 183 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 FAM49AQ9H0Q0 323 aaPredicted RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 UNC45AQ9H3U1 944 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 IGFLR1Q9H665 355 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 NRBP2Q9NSY0 501 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 GJB4Q9NTQ9 266 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 CLEC1BQ9P126 229 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
SSX4B-202ENST00000619890 NOL7Q9UMY1 257 aaKnown RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
SSX4B-202ENST00000619890 NLRC5Q86WI3 1866 aa6.77□□□□□ -1.33
SSX4B-202ENST00000619890 CEP295Q9C0D2 2601 aa6.77□□□□□ -1.33
SSX4B-202ENST00000619890 SPEGQ15772 3267 aa6.77□□□□□ -1.33
SSX4B-202ENST00000619890 ZBTB42B2RXF5 422 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms