RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 A0A0U1RQF3 1178 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 EPOPA6NHQ4 379 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 PLA2G4BP0C869 781 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 IGFBP4P22692 258 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 IFNLR1Q8IU57 520 aaPredicted RBP20.88■□□□□ 0.93
SUSD3-205ENST00000617293 SYT2Q8N9I0 419 aaPredicted RBP20.88■□□□□ 0.93
SUSD3-205ENST00000617293 KRI1Q8N9T8 703 aaKnown RBP20.88■□□□□ 0.93
SUSD3-205ENST00000617293 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 BSNDQ8WZ55 320 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 KIFAP3Q92845 792 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 IFT74Q96LB3 600 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 RUSC1Q9BVN2 902 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 CCSER1Q9C0I3 900 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 CHD7Q9P2D1 2997 aa20.88■□□□□ 0.93
SUSD3-205ENST00000617293 FGFR1P11362 822 aa20.87■□□□□ 0.93
SUSD3-205ENST00000617293 MBTD1Q05BQ5 628 aa20.87■□□□□ 0.93
SUSD3-205ENST00000617293 NCBP1Q09161 790 aaKnown RBP20.87■□□□□ 0.93
SUSD3-205ENST00000617293 PCBP1Q15365 356 aaKnown RBP eCLIP20.87■□□□□ 0.93
SUSD3-205ENST00000617293 C1orf186Q6ZWK4 172 aa20.87■□□□□ 0.93
SUSD3-205ENST00000617293 USP49Q70CQ1 688 aa20.87■□□□□ 0.93
SUSD3-205ENST00000617293 ZBTB8OSQ8IWT0 167 aa20.87■□□□□ 0.93
SUSD3-205ENST00000617293 CMTR2Q8IYT2 770 aaKnown RBP20.87■□□□□ 0.93
SUSD3-205ENST00000617293 TBKBP1A7MCY6 615 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 SPTLC2O15270 562 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 TSPAN1O60635 241 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 HIP1RO75146 1068 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 PLCG1P19174 1290 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 HOXA11P31270 313 aaPredicted RBP20.86■□□□□ 0.93
SUSD3-205ENST00000617293 SLC12A3P55017 1021 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 RAD51AP2Q09MP3 1159 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 ADGRE1Q14246 886 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 DHX8Q14562 1220 aaKnown RBP20.86■□□□□ 0.93
SUSD3-205ENST00000617293 PPP2R5AQ15172 486 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 TMEM192Q8IY95 271 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 DEPTORQ8TB45 409 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 SYMPKQ92797 1274 aaKnown RBP20.86■□□□□ 0.93
SUSD3-205ENST00000617293 CPB2Q96IY4 423 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 FAM105AQ9NUU6 356 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
SUSD3-205ENST00000617293 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
SUSD3-205ENST00000617293 YEATS4O95619 227 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 EOMESO95936 686 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 SKIP12755 728 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 AXLP30530 894 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 TXLNAP40222 546 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 NAMPTP43490 491 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
SUSD3-205ENST00000617293 LONRF3Q496Y0 759 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 EPC2Q52LR7 807 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 FBXO22Q8NEZ5 403 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 LRRC15Q8TF66 581 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 DRC1Q96MC2 740 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 SAMD11Q96NU1 681 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 TRAIPQ9BWF2 469 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 C2orf40Q9H1Z8 148 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 MRPL42Q9Y6G3 142 aaKnown RBP20.85■□□□□ 0.93
SUSD3-205ENST00000617293 FNDC1Q4ZHG4 1894 aaPredicted RBP20.85■□□□□ 0.93
SUSD3-205ENST00000617293 NLRC5Q86WI3 1866 aa20.85■□□□□ 0.93
SUSD3-205ENST00000617293 COL4A6Q14031 1691 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 CCDC169A6NNP5 214 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 SFI1A8K8P3 1242 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 HOXA2O43364 376 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 PPP6R2O75170 966 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 BRD1O95696 1058 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 LIG1P18858 919 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 PEX3P56589 373 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 DNM1Q05193 864 aaKnown RBP20.84■□□□□ 0.93
SUSD3-205ENST00000617293 MCM6Q14566 821 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 CDCA2Q69YH5 1023 aaPredicted RBP20.84■□□□□ 0.93
SUSD3-205ENST00000617293 NOTUMQ6P988 496 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 ZNF598Q86UK7 904 aaKnown RBP20.84■□□□□ 0.93
SUSD3-205ENST00000617293 ABI1Q8IZP0 508 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 GDPD5Q8WTR4 605 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 RAD54LQ92698 747 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 KIFC3Q9BVG8 833 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 TIPINQ9BVW5 301 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 BLOC1S4Q9NUP1 217 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 ZDHHC9Q9Y397 364 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 PCDHB2Q9Y5E7 798 aa20.84■□□□□ 0.93
SUSD3-205ENST00000617293 NPHP3-ACAD11A0A0J9YXS1 232 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 B4GALT5O43286 388 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 ATF7P17544 494 aaPredicted RBP20.83■□□□□ 0.93
SUSD3-205ENST00000617293 ARF4P18085 180 aaPredicted RBP20.83■□□□□ 0.93
SUSD3-205ENST00000617293 CTNNB1P35222 781 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 RAB27AP51159 221 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 MAPK6Q16659 721 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 AMHR2Q16671 573 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 SPOUT1Q5T280 376 aaKnown RBP20.83■□□□□ 0.93
SUSD3-205ENST00000617293 ATL3Q6DD88 541 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 DAW1Q8N136 415 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 CLP1Q92989 425 aaKnown RBP20.83■□□□□ 0.93
SUSD3-205ENST00000617293 LPPQ93052 612 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 PANK2Q9BZ23 570 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 TMEM117Q9H0C3 514 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 FZD8Q9H461 694 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 RNF19AQ9NV58 838 aa20.83■□□□□ 0.93
SUSD3-205ENST00000617293 PRMT7Q9NVM4 692 aaPredicted RBP20.83■□□□□ 0.93
SUSD3-205ENST00000617293 KCND2Q9NZV8 630 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms