RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PRUNE1Q86TP1 453 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DRAXINQ8NBI3 349 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PHTF1Q9UMS5 762 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 STARD3NLO95772 234 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MMP13P45452 471 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 BNIP1Q12981 228 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 HGSNATQ68CP4 663 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ECHDC2Q86YB7 292 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 RBBP8NLQ8NC74 664 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ATXN2LQ8WWM7 1075 aaKnown RBP15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ANAPC5Q9UJX4 755 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 GCLCP48506 637 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 HSPA2P54652 639 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 COASYQ13057 564 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PIGWQ7Z7B1 504 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CROCCP2Q86T23 111 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ANKRD35Q8N283 1001 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 SHCBP1LQ9BZQ2 653 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DENND2DQ9H6A0 471 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 USP40Q9NVE5 1235 aa15.01□□□□□ -0.01
TNFRSF11A-205ENST00000616710 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZBED4O75132 1171 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ATF2P15336 505 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MAPK7Q13164 816 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 KHDC1Q4VXA5 237 aaKnown RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZC2HC1CQ53FD0 456 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZC3H12AQ5D1E8 599 aaKnown RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 FIGNQ5HY92 759 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CCDC174Q6PII3 467 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 IZUMO2Q6UXV1 221 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 AGGF1Q8N302 714 aaeCLIP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CCDC97Q96F63 343 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PCDHA6Q9UN73 950 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PCDHA8Q9Y5H6 950 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CYP27B1O15528 508 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PJA2O43164 708 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CHMP2AO43633 222 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PIK3CAP42336 1068 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CASP7P55210 303 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TBC1D25Q3MII6 688 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CCDC152Q4G0S7 254 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 RFWD3Q6PCD5 774 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ST13P4Q8IZP2 240 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 GUF1Q8N442 669 aaKnown RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ACTRT1Q8TDG2 376 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ERLEC1Q96DZ1 483 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 FAM210AQ96ND0 272 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MARCOQ9UEW3 520 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PCDHA12Q9UN75 941 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PGM3O95394 542 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 USP46P62068 366 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 UBE2SQ16763 222 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 SCFD2Q8WU76 684 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CNKSR1Q969H4 720 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PHF12Q96QT6 1004 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ARMCX1Q9P291 453 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 GTF3C5Q9Y5Q8 519 aaPredicted RBP15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CNTNAP5Q8WYK1 1306 aa15□□□□□ -0.01
TNFRSF11A-205ENST00000616710 RIPK2O43353 540 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DCTN3O75935 186 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 HAUS5O94927 633 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TPBGLP0DKB5 382 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 IRX4P78413 519 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 C1orf146Q5VVC0 180 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 RASSF3Q86WH2 238 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 NUDT12Q9BQG2 462 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PCMTD2Q9NV79 361 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 MAP3K15Q6ZN16 1313 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CLDN3O15551 220 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZCWPW2Q504Y3 356 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZBTB38Q8NAP3 1195 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TTC17Q96AE7 1141 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 THAP2Q9H0W7 228 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 SYNCQ9H7C4 482 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DCLRE1BQ9H816 532 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 FRMPD1Q5SYB0 1578 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PGM1P36871 562 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PPP2R5CQ13362 524 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 PPP1R21Q6ZMI0 780 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ZNF662Q6ZS27 426 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 KRT25Q7Z3Z0 450 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CCSER1Q9C0I3 900 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 CYP4F11Q9HBI6 524 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 LARSQ9P2J5 1176 aaKnown RBP14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 WDR35Q9P2L0 1181 aa14.99□□□□□ -0.01
TNFRSF11A-205ENST00000616710 DKC1O60832 514 aaKnown RBP eCLIP14.98□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
TNFRSF11A-205ENST00000616710 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
TNFRSF11A-205ENST00000616710 ECHS1P30084 290 aa14.98□□□□□ -0.01
TNFRSF11A-205ENST00000616710 KRT17Q04695 432 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms