RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PIAS1O75925 651 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 GNAT1P11488 350 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 CYP11B2P19099 503 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 AUHQ13825 339 aaKnown RBP14.17□□□□□ -0.14
MSH6-214ENST00000616033 EAPPQ56P03 285 aaPredicted RBP14.17□□□□□ -0.14
MSH6-214ENST00000616033 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 PIGWQ7Z7B1 504 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 KIAA0825Q8IV33 1275 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 TAB3Q8N5C8 712 aaPredicted RBP14.17□□□□□ -0.14
MSH6-214ENST00000616033 SLC20A1Q8WUM9 679 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 ATG4AQ8WYN0 398 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 HAS1Q92839 578 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
MSH6-214ENST00000616033 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
MSH6-214ENST00000616033 KIAA0391O15091 583 aaKnown RBP14.16□□□□□ -0.14
MSH6-214ENST00000616033 GNA14O95837 355 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 YY1P25490 414 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 NMT1P30419 496 aaKnown RBP14.16□□□□□ -0.14
MSH6-214ENST00000616033 CTCFP49711 727 aaPredicted RBP14.16□□□□□ -0.14
MSH6-214ENST00000616033 RPS6KA3P51812 740 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 MAPK7Q13164 816 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 USH1GQ495M9 461 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 DAGLBQ8NCG7 672 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 LRRC27Q9C0I9 530 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 METTL5Q9NRN9 209 aaKnown RBP14.16□□□□□ -0.14
MSH6-214ENST00000616033 ADAM22Q9P0K1 906 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 RPTORQ8N122 1335 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 BCL9O00512 1426 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 BAG3O95817 575 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 NR3C1P04150 777 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 PAEPP09466 180 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 KLRC3Q07444 240 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 DUPD1Q68J44 220 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 TTC27Q6P3X3 843 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 C9orf72Q96LT7 481 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 REEP2Q9BRK0 252 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 PCIF1Q9H4Z3 704 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 ZBTB39O15060 712 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 ASAP2O43150 1006 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 TBCAO75347 108 aaKnown RBP14.16□□□□□ -0.14
MSH6-214ENST00000616033 PTENP60484 403 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 GRIK3Q13003 919 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 C2CD6Q53TS8 623 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 ZDHHC24Q6UX98 284 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 ERP27Q96DN0 273 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 PIDD1Q9HB75 910 aa14.16□□□□□ -0.14
MSH6-214ENST00000616033 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 GNPATO15228 680 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 DNAJC3Q13217 504 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 KCTD10Q9H3F6 313 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 PSTPIP2Q9H939 334 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 COG5Q9UP83 839 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 AFF2P51816 1311 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 CFAP73A6NFT4 308 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 RIPK2O43353 540 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 CALCAP01258 141 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 ABL2P42684 1182 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 BTDP43251 543 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 SLC8A3P57103 927 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 LAMB3Q13751 1172 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 ITIH4Q14624 930 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 KNOP1Q1ED39 458 aaKnown RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 SEL1L2Q5TEA6 688 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 C1orf131Q8NDD1 294 aaKnown RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 B4GALNT2Q8NHY0 566 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 P3H4Q92791 437 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 ZDHHC18Q9NUE0 388 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 CICQ96RK0 1608 aaPredicted RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 SPDYE5A6NIY4 337 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 POC1B-GALNT4F8VUJ3 575 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 THAP12O43422 761 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 FTLP02792 175 aaPredicted RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■■■■ 27.6
MSH6-214ENST00000616033 TMED2Q15363 201 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 CCDC6Q16204 474 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 C11orf91Q3C1V1 193 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 FBF1Q8TES7 1133 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 NAF1Q96HR8 494 aaKnown RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 HES6Q96HZ4 224 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 SH2D3AQ9BRG2 576 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 HEMGNQ9BXL5 484 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 PITPNM3Q9BZ71 974 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 USP21Q9UK80 565 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 BZW2Q9Y6E2 419 aaKnown RBP14.15□□□□□ -0.14
MSH6-214ENST00000616033 RPS6KL1Q9Y6S9 549 aa14.15□□□□□ -0.14
MSH6-214ENST00000616033 EP400Q96L91 3159 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms