RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 SLC9A2Q9UBY0 812 aa10.83□□□□□ -0.68
GGA3-221ENST00000614198 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
GGA3-221ENST00000614198 NDUFAB1O14561 156 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 ADCY6O43306 1168 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 ABL1P00519 1130 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 P4HBP07237 508 aaKnown RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 PBX1P40424 430 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 IRX1P78414 480 aaPredicted RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 MAPK7Q13164 816 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 PLCB4Q15147 1175 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 XKR9Q5GH70 373 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 CCDC70Q6NSX1 233 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 MICALCLQ6ZW33 695 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 MYPNQ86TC9 1320 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 RDH13Q8NBN7 331 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 TRAPPC12Q8WVT3 735 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 RPGRIP1Q96KN7 1286 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 GPBP1L1Q9HC44 474 aaPredicted RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 ARHGEF35A5YM69 484 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 GGPS1O95749 300 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 CASP4P49662 377 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 DNA2P51530 1060 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 DRP2Q13474 957 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 NAIF1Q69YI7 327 aaPredicted RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 CNOT6LQ96LI5 555 aaKnown RBP10.82□□□□□ -0.68
GGA3-221ENST00000614198 FIZ1Q96SL8 496 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 TUFT1Q9NNX1 390 aa10.82□□□□□ -0.68
GGA3-221ENST00000614198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.82□□□□□ -0.68
GGA3-221ENST00000614198 RASSF9O75901 435 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 GJB1P08034 283 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PAX7P23759 505 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 CCNE1P24864 410 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 CTGFP29279 349 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 SARNPP82979 210 aaKnown RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 CCL14Q16627 93 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MTERF2Q49AM1 385 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 FAM102BQ5T8I3 360 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 TMTC1Q8IUR5 882 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MYOCDQ8IZQ8 938 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MB21D1Q8N884 522 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 BSNDQ8WZ55 320 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PPP1R16BQ96T49 567 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PSMB7Q99436 277 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PCYT2Q99447 389 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 ARHGAP39Q9C0H5 1083 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 TBC1D22BQ9NU19 505 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 ZSWIM8A7E2V4 1837 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PVALEFA0A1B0GWK0 134 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 AOC2O75106 756 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 ODR4Q5SWX8 454 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 CENPPQ6IPU0 288 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 CNGA4Q8IV77 575 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 HOMEZQ8IX15 550 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 CCDC65Q8IXS2 484 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 TFR2Q9UP52 801 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 SH3BP1Q9Y3L3 701 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PCDHA10Q9Y5I2 948 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 DNAJC25-GNG10A0A024R161 153 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 WDR64B1ANS9 1081 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 OPA1O60313 960 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 STBD1O95210 358 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 EPB41P11171 864 aaKnown RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 ATP1A2P50993 1020 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 FXR1P51114 621 aaKnown RBP eCLIP10.81□□□□□ -0.68
GGA3-221ENST00000614198 COPB1P53618 953 aaKnown RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 UBXN1Q04323 297 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 ACTN3Q08043 901 aaPredicted RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 GPR142Q7Z601 462 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 NPLOC4Q8TAT6 608 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 TMEM143Q96AN5 459 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MMS19Q96T76 1030 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 KCTD10Q9H3F6 313 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 PCIF1Q9H4Z3 704 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MAGEF1Q9HAY2 307 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MAP3K20Q9NYL2 800 aaKnown RBP10.81□□□□□ -0.68
GGA3-221ENST00000614198 FLRT1Q9NZU1 646 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
GGA3-221ENST00000614198 MYH9P35579 1960 aaKnown RBP10.8□□□□□ -0.68
GGA3-221ENST00000614198 SYNGAP1Q96PV0 1343 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 GSTTP1A0A1W2PQM5 241 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 EPHB6O15197 1021 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 SLC16A4O15374 487 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 ATP2C2O75185 946 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 RTN2O75298 545 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 TBCAO75347 108 aaKnown RBP10.8□□□□□ -0.68
GGA3-221ENST00000614198 FARP2O94887 1054 aaPredicted RBP10.8□□□□□ -0.68
GGA3-221ENST00000614198 FAM13AO94988 1023 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 KRT9P35527 623 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 PRKCEQ02156 737 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 ABHD15Q6UXT9 468 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.68
GGA3-221ENST00000614198 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
GGA3-221ENST00000614198 GPRASP2Q96D09 838 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 CEP170P1Q96L14 293 aa10.8□□□□□ -0.68
GGA3-221ENST00000614198 TRIM6Q9C030 488 aaPredicted RBP10.8□□□□□ -0.68
GGA3-221ENST00000614198 MMRN2Q9H8L6 949 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms