RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 MAEAQ7L5Y9 396 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 HLA-CQ95604 372 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 CCDC51Q96ER9 411 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
CBWD1-221ENST00000613355 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
CBWD1-221ENST00000613355 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
CBWD1-221ENST00000613355 PUF60Q9UHX1 559 aaKnown RBP13.68□□□□□ -0.22
CBWD1-221ENST00000613355 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
CBWD1-221ENST00000613355 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 ZBTB39O15060 712 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 FGFR1P11362 822 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 ATP2C1P98194 919 aaPredicted RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 KRT17Q04695 432 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 UBE3AQ05086 875 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
CBWD1-221ENST00000613355 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
CBWD1-221ENST00000613355 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 LPXNO60711 386 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 PTENP60484 403 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 EP400NLQ6ZTU2 488 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 MICAL1Q8TDZ2 1067 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 AK8Q96MA6 479 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
CBWD1-221ENST00000613355 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
CBWD1-221ENST00000613355 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
CBWD1-221ENST00000613355 DLL1O00548 723 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 SLC26A4O43511 780 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 CYP11B2P19099 503 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 ARL2P36404 184 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 UBA7P41226 1012 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
CBWD1-221ENST00000613355 GATMP50440 423 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 CAPSQ13938 189 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 MAPK6Q16659 721 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 PDE12Q6L8Q7 609 aaKnown RBP13.65□□□□□ -0.22
CBWD1-221ENST00000613355 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
CBWD1-221ENST00000613355 KLHL23Q8NBE8 558 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 PRIMPOLQ96LW4 560 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
CBWD1-221ENST00000613355 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
CBWD1-221ENST00000613355 KANSL3Q9P2N6 904 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 KIAA1671Q9BY89 1806 aa13.65□□□□□ -0.22
CBWD1-221ENST00000613355 ZNF623O75123 536 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 EYA4O95677 639 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 GLRA2P23416 452 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 TXLNAP40222 546 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 NAMPTP43490 491 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 EFNA5P52803 228 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 COLGALT1Q8NBJ5 622 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 SNX21Q969T3 373 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
CBWD1-221ENST00000613355 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 A0A087WWV3 80 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 GRM6O15303 877 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 NR1I2O75469 434 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 FGF18O76093 207 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBWD1-221ENST00000613355 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 ITGA4P13612 1032 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 SYT1P21579 422 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
CBWD1-221ENST00000613355 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
CBWD1-221ENST00000613355 RSAD1Q9HA92 442 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms