RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 PLD3Q8IV08 490 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 USP7Q93009 1102 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 LSM14BQ9BX40 385 aaKnown RBP11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TNRQ92752 1358 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CPP00450 1065 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CFBP00751 764 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PCGF5Q86SE9 256 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 OR6P1Q8NGX9 317 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 DPF1Q92782 380 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 NKD1Q969G9 470 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KDM4CQ9H3R0 1056 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 COPB2P35606 906 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PPARGP37231 505 aaPredicted RBP11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ZNF827Q17R98 1081 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PSTPIP2Q9H939 334 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CATSPERZQ9NTU4 200 aa11.5□□□□□ -0.57
CNTNAP3B-211ENST00000612828 NFKBIAP25963 317 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 HPCAP84074 193 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CNGA3Q16281 694 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KLHL14Q9P2G3 628 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KCNH3Q9ULD8 1083 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ATP8B3O60423 1300 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ZSWIM7Q19AV6 140 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SCN4BQ8IWT1 228 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 HEXDCQ8WVB3 486 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ING3Q9NXR8 418 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PCDHGB4Q9UN71 923 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ZNF202O95125 648 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PAX7P23759 505 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 LIG4P49917 911 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 OSTNP61366 133 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 JPH2Q9BR39 696 aaPredicted RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MLNP12872 115 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 BBS9Q3SYG4 887 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KDELC2Q7Z4H8 507 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KIAA0825Q8IV33 1275 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 THOC1Q96FV9 657 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 APPL1Q9UKG1 709 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KCNJ14Q9UNX9 436 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 VWA3AA6NCI4 1184 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MBD4O95243 580 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MTX1Q13505 466 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ADALQ6DHV7 355 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MACC1Q6ZN28 852 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 RFX8Q6ZV50 586 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TRIM42Q8IWZ5 723 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 DPF3Q92784 378 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 NFE2L3Q9Y4A8 694 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 A0A087WUV0 522 aaPredicted RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 S100A1P23297 94 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 FAM117BQ6P1L5 589 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 DESI2Q9BSY9 194 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 IPPQ9Y573 584 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
CNTNAP3B-211ENST00000612828 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 LRRIQ4A6NIV6 560 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 H7C1D1 291 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 EYA2O00167 538 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MOCS3O95396 460 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CDO1Q16878 200 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 CLCC1Q96S66 551 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TBK1Q9UHD2 729 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MAGEB6P1A0A0J9YX57 407 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 RHAGQ02094 409 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SGSM1Q2NKQ1 1148 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SLFN12LQ6IEE8 588 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 TAS2R42Q7RTR8 314 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MAGEB6Q8N7X4 407 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KRT84Q9NSB2 600 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ESR2Q92731 530 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 MAGED4Q96JG8 741 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 BCRP11274 1271 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 SLC44A2Q8IWA5 706 aaPredicted RBP11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 S100A13Q99584 98 aa11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 ALDH8A1Q9H2A2 487 aaPredicted RBP11.48□□□□□ -0.57
CNTNAP3B-211ENST00000612828 EXOSC4Q9NPD3 245 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms