RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 MAEAQ7L5Y9 396 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 HLA-CQ95604 372 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 CCDC51Q96ER9 411 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 POLR3FQ9H1D9 316 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-208ENST00000612050 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
CBWD3-208ENST00000612050 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-208ENST00000612050 PUF60Q9UHX1 559 aaKnown RBP13.68□□□□□ -0.22
CBWD3-208ENST00000612050 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
CBWD3-208ENST00000612050 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 ZBTB39O15060 712 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 FGFR1P11362 822 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 ATP2C1P98194 919 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 KRT17Q04695 432 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 UBE3AQ05086 875 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
CBWD3-208ENST00000612050 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-208ENST00000612050 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 LPXNO60711 386 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 PTENP60484 403 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 EP400NLQ6ZTU2 488 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 MICAL1Q8TDZ2 1067 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 AK8Q96MA6 479 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-208ENST00000612050 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
CBWD3-208ENST00000612050 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
CBWD3-208ENST00000612050 DLL1O00548 723 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 SLC26A4O43511 780 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 CYP11B2P19099 503 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 ARL2P36404 184 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 UBA7P41226 1012 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
CBWD3-208ENST00000612050 GATMP50440 423 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 CAPSQ13938 189 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 MAPK6Q16659 721 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 PDE12Q6L8Q7 609 aaKnown RBP13.65□□□□□ -0.22
CBWD3-208ENST00000612050 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-208ENST00000612050 KLHL23Q8NBE8 558 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 PRIMPOLQ96LW4 560 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-208ENST00000612050 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
CBWD3-208ENST00000612050 KANSL3Q9P2N6 904 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 FAM50BQ9Y247 325 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 KIAA1671Q9BY89 1806 aa13.65□□□□□ -0.22
CBWD3-208ENST00000612050 ZNF623O75123 536 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 EYA4O95677 639 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 GLRA2P23416 452 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 TXLNAP40222 546 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 NAMPTP43490 491 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 EFNA5P52803 228 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 COLGALT1Q8NBJ5 622 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 SNX21Q969T3 373 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
CBWD3-208ENST00000612050 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 A0A087WWV3 80 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 GRM6O15303 877 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 NR1I2O75469 434 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 FGF18O76093 207 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBWD3-208ENST00000612050 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 ITGA4P13612 1032 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 SYT1P21579 422 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
CBWD3-208ENST00000612050 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 RSAD1Q9HA92 442 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms