RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SP8Q8IXZ3 490 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 TRIM4Q9C037 500 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 MYH7BA7E2Y1 1941 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 HSF2BPO75031 334 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 MICALCLQ6ZW33 695 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 MMGT1Q8N4V1 131 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 USP33Q8TEY7 942 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 SCFD1Q8WVM8 642 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 PMM1Q92871 262 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 CUL5Q93034 780 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 SPDL1Q96EA4 605 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 ABT1Q9ULW3 272 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 KCNH2Q12809 1159 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 GRM1Q13255 1194 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 APOBEC3HQ6NTF7 200 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 MFN1Q8IWA4 741 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 TRIM31Q9BZY9 425 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
PCDHGC3-202ENST00000611950 CHMP2AO43633 222 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 FGFR1OPO95684 399 aaKnown RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 HNRNPH3P31942 346 aaKnown RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 CASP4P49662 377 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 EPHB4P54760 987 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 UBXN2AP68543 259 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 PTK2Q05397 1052 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 ASTE1Q2TB18 679 aaPredicted RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 OLFML1Q6UWY5 402 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZBTB5O15062 677 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 RAD51CO43502 376 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 CEP104O60308 925 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 GDF11O95390 407 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 MYBP10242 640 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 CDK17Q00537 523 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 NNTQ13423 1086 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 ASIC2Q16515 512 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 CWF19L1Q69YN2 538 aaKnown RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 PNMA8AQ86V59 439 aaPredicted RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 CASKIN2Q8WXE0 1202 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 BRD8Q9H0E9 1235 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 RSPH9Q9H1X1 276 aaPredicted RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 SWAP70Q9UH65 585 aa11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 AJAP1Q9UKB5 411 aaPredicted RBP11.58□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZBTB39O15060 712 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 AHCYL1O43865 530 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 FESP07332 822 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 SEC24CP53992 1094 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLC8A3P57103 927 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 TBC1D10BQ4KMP7 808 aaPredicted RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZCWPW2Q504Y3 356 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 CFAP58Q5T655 872 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 SFR1Q86XK3 245 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 RBM41Q96IZ5 413 aaKnown RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 CABS1Q96KC9 395 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 DDX47Q9H0S4 455 aaKnown RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 CEP72Q9P209 647 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 COMMD10Q9Y6G5 202 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 GREB1LQ9C091 1923 aaPredicted RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 FRMD3A2A2Y4 597 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 GRID2IPA4D2P6 1211 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 SERPING1P05155 500 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 PLS1Q14651 629 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 Q4G0T1 1027 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 ARSHQ5FYA8 562 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 HDAC9Q9UKV0 1011 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 MYO3BQ8WXR4 1341 aa11.57□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF233A6NK53 670 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 TRIM64CA6NLI5 447 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 G3V3G9 751 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 NDUFAB1O14561 156 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms