RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CAPN6Q9Y6Q1 641 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 KRT1P04264 644 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 MXRA7P84157 204 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 ZNF564Q8TBZ8 553 aaPredicted RBP14.14□□□□□ -0.15
TCF3-220ENST00000611869 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 AMACRQ9UHK6 382 aa14.14□□□□□ -0.15
TCF3-220ENST00000611869 NFIBO00712 420 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 LDHAP00338 332 aaKnown RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 ABCD1P33897 745 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PPP2R5DQ14738 602 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PALM2Q8IXS6 379 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 GLIS3Q8NEA6 775 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 GMCL1P1Q8NEA9 526 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.13□□□□□ -0.159e-7■■□□□ 14
TCF3-220ENST00000611869 NUP85Q9BW27 656 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 FAM198AQ9UFP1 575 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PLAAQ9Y263 795 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 MIF4GDA9UHW6 222 aaKnown RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 SGK1O00141 431 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PLS3P13797 630 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 ACOT2P49753 483 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 CUL1Q13616 776 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 C7orf31Q8N865 590 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PSPC1Q8WXF1 523 aaKnown RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 IDI2Q9BXS1 227 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 FAM49AQ9H0Q0 323 aaPredicted RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 GPRC5CQ9NQ84 441 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 ARHGAP20Q9P2F6 1191 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 SYNJ2BP-COX16A0A087WUM0 186 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 POC1B-GALNT4F8VUJ3 575 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 M0QZ92 97 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 NR1D1P20393 614 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 TNFRSF25Q93038 417 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
TCF3-220ENST00000611869 COX16Q9P0S2 106 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
TCF3-220ENST00000611869 LIG3P49916 1009 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 HERVK_113P62684 666 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 NEDD9Q14511 834 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 RHPN2Q8IUC4 686 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 CCDC13Q8IYE1 715 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 GPD1LQ8N335 351 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 RUNDC3BQ96NL0 473 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 KIAA1586Q9HCI6 787 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 AGPAT3Q9NRZ7 376 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 ICAM1P05362 532 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 GBP1P32455 592 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 PDCLQ13371 301 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 SNRNP35Q16560 246 aaKnown RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 CACNA2D3Q8IZS8 1091 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 HAUS1Q96CS2 278 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 SLC26A4O43511 780 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 AKAP3O75969 853 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 CNGA1P29973 690 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 CALN1Q9BXU9 219 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 TTLL3Q9Y4R7 772 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 DGAT1O75907 488 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 ALDH3A1P30838 453 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 ARHGAP25P42331 645 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 HNRNPH2P55795 449 aaKnown RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 ZNF568Q3ZCX4 644 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 SLC30A5Q8TAD4 765 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 PNKPQ96T60 521 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 CHORDC1Q9UHD1 332 aaPredicted RBP14.12□□□□□ -0.15
TCF3-220ENST00000611869 ANAPC5Q9UJX4 755 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 SYNGAP1Q96PV0 1343 aa14.12□□□□□ -0.15
TCF3-220ENST00000611869 A0A0U1RQJ8 604 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 H7C0C1 242 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 CTNND1O60716 968 aaKnown RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 ATP5OP48047 213 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 NAB2Q15742 525 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 INTS9Q9NV88 658 aaKnown RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 EIF3DO15371 548 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCF3-220ENST00000611869 KLRC4O43908 158 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 FIGNQ5HY92 759 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 GKAP1Q5VSY0 366 aaPredicted RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 PNMA8AQ86V59 439 aaPredicted RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 ERICH1Q86X53 443 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 DNAAF5Q86Y56 855 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 RFX6Q8HWS3 928 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 SLC35G2Q8TBE7 412 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 FAM149B1Q96BN6 582 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 TBK1Q9UHD2 729 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 ACSL3O95573 720 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 TKFCQ3LXA3 575 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 VSIG1Q86XK7 387 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms