RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 SRP68Q9UHB9 627 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 MID2Q9UJV3 735 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 ARHGEF40Q8TER5 1519 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 RHOBTB3O94955 611 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 CPP00450 1065 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 TMPRSS15P98073 1019 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 NCAPHQ15003 741 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 KLHL38Q2WGJ6 581 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 FAM47CQ5HY64 1035 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 OLFML1Q6UWY5 402 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 DHX36Q9H2U1 1008 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 DLGAP2Q9P1A6 1054 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 PDS5AQ29RF7 1337 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 EIF4E1BA6NMX2 242 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 NVLO15381 856 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 RAD51CO43502 376 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 TOM1L1O75674 476 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 SERPINI2O75830 405 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 ARL4CP56559 192 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 ROR2Q01974 943 aaKnown RBP9.74□□□□□ -0.85
COL25A1-208ENST00000610288 SLC7A3Q8WY07 619 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 TTC17Q96AE7 1141 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 MED10Q9BTT4 135 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 WNT8AQ9H1J5 351 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 SPC25Q9HBM1 224 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 AFG3L2Q9Y4W6 797 aa9.74□□□□□ -0.85
COL25A1-208ENST00000610288 CRB1P82279 1406 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ARHGEF9O43307 516 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 CDH16O75309 829 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 FAM200BP0CF97 657 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 CDK8P49336 464 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 IGBP1P78318 339 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 BASP1P80723 227 aaKnown RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ALCAMQ13740 583 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 UBE2SQ16763 222 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 FAM160B1Q5W0V3 765 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 RAD54LQ92698 747 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TTC1Q99614 292 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ANO3Q9BYT9 981 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ROPN1BQ9BZX4 212 aaPredicted RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ROPN1Q9HAT0 212 aaPredicted RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 HPSEQ9Y251 543 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 CDC42BPAQ5VT25 1732 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 SNAP23O00161 211 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 COPEO14579 308 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 E2F6O75461 281 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 AARSP49588 968 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 COASYQ13057 564 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 RFX6Q8HWS3 928 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ARL8AQ96BM9 186 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 SCYL1Q96KG9 808 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 PCIF1Q9H4Z3 704 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 GLI2P10070 1586 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TTI1O43156 1089 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 RPS6KA5O75582 802 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 MMP10P09238 476 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 KRT3P12035 628 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 ACADSP16219 412 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 GRAPQ13588 217 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 FAM43BQ6ZT52 329 aaPredicted RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 USP38Q8NB14 1042 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 LRRN4CLQ8ND94 238 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 GRAPLQ8TC17 118 aaPredicted RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 SNRNP27Q8WVK2 155 aaKnown RBP9.73□□□□□ -0.85
COL25A1-208ENST00000610288 C17orf50Q8WW18 174 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 SNF8Q96H20 258 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 PI4KBQ9UBF8 816 aa9.73□□□□□ -0.85
COL25A1-208ENST00000610288 TJP3O95049 919 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SCTRP47872 440 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 STAT2P52630 851 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ERVK-24P63145 666 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ITIH4Q14624 930 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SYDE2Q5VT97 1194 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CATSPER2Q96P56 530 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ERGIC2Q96RQ1 377 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 KMT5AQ9NQR1 393 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 GINM1Q9NU53 330 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SMG5Q9UPR3 1016 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 APOBEC2Q9Y235 224 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SLC4A7Q9Y6M7 1214 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CROCC2H7BZ55 1655 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 MAGEA13PA6NCF6 341 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 NR3C1P04150 777 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 RFX1P22670 979 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SKOR1P84550 965 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ART3Q13508 389 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 RABL6Q3YEC7 729 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms