RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 ZMYND10O75800 440 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 MYZAPP0CAP1 466 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 MATR3P43243 847 aaKnown RBP eCLIP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 BTDP43251 543 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CCNA1P78396 465 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CYP27A1Q02318 531 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 GRIN2CQ14957 1233 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CDC37Q16543 378 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 NAALADL2Q58DX5 795 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 SPDYCQ5MJ68 293 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 RASIP1Q5U651 963 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 HAUS3Q68CZ6 603 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 PDXDC1Q6P996 788 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CCDC121Q6ZUS5 278 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 RRAGAQ7L523 313 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 FMNL3Q8IVF7 1028 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 RIN2Q8WYP3 895 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 BADQ92934 168 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 TRIM43Q96BQ3 446 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CCDC43Q96MW1 224 aaKnown RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 ZIM3Q96PE6 472 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 BARHL2Q9NY43 387 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 TMOD4Q9NZQ9 345 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 FLRT1Q9NZU1 646 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 PI4KBQ9UBF8 816 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 SEC63Q9UGP8 760 aaKnown RBP8.28□□□□□ -1.08
LMBR1-221ENST00000609774 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 CDK5RAP2Q96SN8 1893 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 GRIN2DO15399 1336 aa8.28□□□□□ -1.08
LMBR1-221ENST00000609774 MYH1P12882 1939 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CCDC188H7C350 402 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 SEPT4O43236 478 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 STRNO43815 780 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 COBLO75128 1261 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CNMDO75829 334 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 HEXIM1O94992 359 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 FAM107AO95990 144 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 LDHCP07864 332 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 MYBL2P10244 700 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PLCG1P19174 1290 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 DNAJB2P25686 324 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 LSP1P33241 339 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 HSPA9P38646 679 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 SMTNP53814 917 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PMS1P54277 932 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 GSCP56915 257 aaPredicted RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 GSTO1P78417 241 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 MTMR2Q13614 643 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 NAB2Q15742 525 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PTGISQ16647 500 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 MIIPQ5JXC2 388 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 AGBL2Q5U5Z8 902 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 HEATR3Q7Z4Q2 680 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 MAATS1Q7Z4T9 603 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 NEK8Q86SG6 692 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 VPS36Q86VN1 386 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 NLRP14Q86W24 1093 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 GSPT2Q8IYD1 628 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 SYCE1Q8N0S2 351 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 IQCKQ8N0W5 287 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 ZNF444Q8N0Y2 327 aaPredicted RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 TRPV1Q8NER1 839 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 ADAMTS19Q8TE59 1207 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 RRP36Q96EU6 259 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 GDAP1L1Q96MZ0 367 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 TOX2Q96NM4 488 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 TANGO6Q9C0B7 1094 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PLEKHA4Q9H4M7 779 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 ZNF576Q9H609 170 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CNOT10Q9H9A5 744 aaKnown RBP8.27□□□□□ -1.09
LMBR1-221ENST00000609774 EPB41L5Q9HCM4 733 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 PLCB1Q9NQ66 1216 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 ARHGAP20Q9P2F6 1191 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 THEGQ9P2T0 379 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 SIK3Q9Y2K2 1263 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CAPN6Q9Y6Q1 641 aa8.27□□□□□ -1.09
LMBR1-221ENST00000609774 CHD9Q3L8U1 2897 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 ESYT2A0FGR8 921 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 LRRC53A6NM62 1247 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 M0R2N6 131 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 WNT7AO00755 349 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 BAG3O95817 575 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 SLC8A1P32418 973 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 EIF3BP55884 814 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 PRSS12P56730 875 aa8.26□□□□□ -1.09
LMBR1-221ENST00000609774 FKBP3Q00688 224 aaKnown RBP8.26□□□□□ -1.09
LMBR1-221ENST00000609774 GUCY2DQ02846 1103 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms