RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 PLCG2P16885 1265 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 RASSF2P50749 326 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PKN1Q16512 942 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PDXDC2PQ6P474 469 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 TREML1Q86YW5 311 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 UTP6Q9NYH9 597 aaKnown RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 MYH6P13533 1939 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 EIF3FO00303 357 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 RASGRF2O14827 1237 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 KRT38O76015 456 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 NUDT17P0C025 328 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 T-ENOLP0DO92 83 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 AP1B1Q10567 949 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 NAB2Q15742 525 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 THOC7Q6I9Y2 204 aaKnown RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 ST13P4Q8IZP2 240 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 NME8Q8N427 588 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 PLIN2Q99541 437 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 DUSP9Q99956 384 aaKnown RBP13.49□□□□□ -0.25
CTCFL-218ENST00000608440 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
CTCFL-218ENST00000608440 SPTLC1O15269 473 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ECE2O60344 883 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ATP5HO75947 161 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 STARD3NLO95772 234 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 HNRNPH3P31942 346 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 GRIA2P42262 883 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 GSTA3Q16772 222 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TTI2Q6NXR4 508 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 IZUMO2Q6UXV1 221 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 PITPNM3Q9BZ71 974 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 hCG_1642624A0A1W2PR95 340 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 STX2P32856 288 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 HALP42357 657 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 INPP5DQ92835 1189 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TXLNGYQ9BZA5 131 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 RNASEH1O60930 286 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TROVE2P10155 538 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 XBP1P17861 261 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ARFIP2P53365 341 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 GCKRQ14397 625 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 LONRF1Q17RB8 773 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ANKRD40Q6AI12 368 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TRIM22Q8IYM9 498 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 WASF1Q92558 559 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ANKS1AQ92625 1134 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 STMN2Q93045 179 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 PPP1R14BQ96C90 147 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 TRIM11Q96F44 468 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ERGIC2Q96RQ1 377 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
CTCFL-218ENST00000608440 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
CTCFL-218ENST00000608440 ATP9BO43861 1147 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PSMG1O95456 288 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 GSTT2P0CG29 244 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 GSTT2BP0CG30 244 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 CDK4P11802 303 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 TXKP42681 527 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PSMD7P51665 324 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 CYLC2Q14093 348 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 FBXO25Q8TCJ0 367 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 CKAP2Q8WWK9 683 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 ARFGEF2Q9Y6D5 1785 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PDE5AO76074 875 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PGM3O95394 542 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 VPS41P49754 854 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PTGDRQ13258 359 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 MPP2Q14168 576 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 TNIP1Q15025 636 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 TMEM259Q4ZIN3 620 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 FIGNQ5HY92 759 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 ISLR2Q6UXK2 745 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms