RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 HACE1Q8IYU2 909 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 COLGALT1Q8NBJ5 622 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 SPPL3Q8TCT6 385 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 URGCPQ8TCY9 931 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 RALGAPA2Q2PPJ7 1873 aa16.01■□□□□ 0.15
PKNOX1-210ENST00000607049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16■□□□□ 0.15
PKNOX1-210ENST00000607049 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
PKNOX1-210ENST00000607049 ZNF623O75123 536 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 FGF18O76093 207 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 CSPG5O95196 566 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 SPATA31C1P0DKV0 1188 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
PKNOX1-210ENST00000607049 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
PKNOX1-210ENST00000607049 PTGDRQ13258 359 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 LEXMQ3ZCV2 418 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 KRT79Q5XKE5 535 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
PKNOX1-210ENST00000607049 HELQQ8TDG4 1101 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 CCDC51Q96ER9 411 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 TLR9Q9NR96 1032 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 CLDND1Q9NY35 253 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 LZTS1Q9Y250 596 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 WDR81Q562E7 1941 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 LOXHD1Q8IVV2 1947 aa16■□□□□ 0.15
PKNOX1-210ENST00000607049 SRGAP2BP0DMP2 458 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 PTENP60484 403 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 KCNT2Q6UVM3 1135 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 TRIM6Q9C030 488 aaPredicted RBP15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 POLR3FQ9H1D9 316 aaPredicted RBP15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 SPG21Q9NZD8 308 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
PKNOX1-210ENST00000607049 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 MED24O75448 989 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PDCP20941 246 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 ARL2P36404 184 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PRPHP41219 470 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PLCB3Q01970 1234 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PPP2R5AQ15172 486 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 NOMO2Q5JPE7 1267 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 CLLU1OSQ5K130 101 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PTCRAQ6ISU1 281 aaPredicted RBP15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PADI6Q6TGC4 694 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 SNX29Q8TEQ0 813 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 MRPS27Q92552 414 aaKnown RBP15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 FAM193BQ96PV7 902 aaPredicted RBP15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 CWH43Q9H720 699 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 XPNPEP1Q9NQW7 623 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 DNM3Q9UQ16 869 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 INPP5FQ9Y2H2 1132 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
PKNOX1-210ENST00000607049 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 NDUFV1P49821 464 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 CAPSQ13938 189 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 NBR1Q14596 966 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 TMEM132AQ24JP5 1023 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 MAEAQ7L5Y9 396 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 TMEM169Q96HH4 297 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 IFT74Q96LB3 600 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 TLE6Q9H808 572 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 NGRNQ9NPE2 291 aaKnown RBP15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 ENTPD7Q9NQZ7 604 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 STK39Q9UEW8 545 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 TTC28Q96AY4 2481 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 NLRC5Q86WI3 1866 aa15.97■□□□□ 0.15
PKNOX1-210ENST00000607049 A0A087WWV3 80 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 H3BQ06 376 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 ZC3H11AO75152 810 aaKnown RBP eCLIP15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 BMP15O95972 392 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 ITGA4P13612 1032 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 ATF7P17544 494 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 CYP11B2P19099 503 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 GLRA2P23416 452 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 TOB1P50616 345 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 HYAL1Q12794 435 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 COL19A1Q14993 1142 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 TMC7Q7Z402 723 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 C4orf32Q8N8J7 132 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.15
PKNOX1-210ENST00000607049 ASAP3Q8TDY4 903 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms