RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 LRRIQ4A6NIV6 560 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 SLC26A4O43511 780 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 LINC00271P0C7V0 271 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 AXLP30530 894 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
LINC00240-203ENST00000606878 RAB27AP51159 221 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 PPP2R5AQ15172 486 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 ZNF598Q86UK7 904 aaKnown RBP18.35■□□□□ 0.53
LINC00240-203ENST00000606878 KIFAP3Q92845 792 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 PGBD4Q96DM1 585 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 IFT74Q96LB3 600 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 FAM105AQ9NUU6 356 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
LINC00240-203ENST00000606878 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
LINC00240-203ENST00000606878 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
LINC00240-203ENST00000606878 MBTD1Q05BQ5 628 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 SKIV2LQ15477 1246 aaKnown RBP18.34■□□□□ 0.53
LINC00240-203ENST00000606878 HYIQ5T013 277 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 CABP7Q86V35 215 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC00240-203ENST00000606878 ZBTB8OSQ8IWT0 167 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 P2RX5Q93086 422 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 MRPL38Q96DV4 380 aaKnown RBP18.34■□□□□ 0.53
LINC00240-203ENST00000606878 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 CASD1Q96PB1 797 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 PLIN2Q99541 437 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 C2orf40Q9H1Z8 148 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 PCDHB2Q9Y5E7 798 aa18.34■□□□□ 0.53
LINC00240-203ENST00000606878 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.52
LINC00240-203ENST00000606878 NOTUMQ6P988 496 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 CNNM3Q8NE01 707 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 DEPTORQ8TB45 409 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 RSPH1Q8WYR4 309 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 CCDC51Q96ER9 411 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 PNMA5Q96PV4 448 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 LMAN2LQ9H0V9 348 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 POLD4Q9HCU8 107 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 RNF19AQ9NV58 838 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 CHD7Q9P2D1 2997 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 PLAGL2Q9UPG8 496 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 CDH23Q9H251 3354 aa18.33■□□□□ 0.52
LINC00240-203ENST00000606878 TSPAN1O60635 241 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 SSBP05455 408 aaKnown RBP eCLIP18.32■□□□□ 0.522e-14■■■■■ 48
LINC00240-203ENST00000606878 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
LINC00240-203ENST00000606878 NAMPTP43490 491 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 PTPAQ15257 358 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 RINT1Q6NUQ1 792 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 GLB1LQ6UWU2 654 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 KCNK18Q7Z418 384 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 MRPL10Q7Z7H8 261 aaKnown RBP18.32■□□□□ 0.52
LINC00240-203ENST00000606878 KLHL23Q8NBE8 558 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 HELQQ8TDG4 1101 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 PRMT7Q9NVM4 692 aaPredicted RBP18.32■□□□□ 0.52
LINC00240-203ENST00000606878 KCNG1Q9UIX4 513 aa18.32■□□□□ 0.52
LINC00240-203ENST00000606878 COL4A6Q14031 1691 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 COL6A3P12111 3177 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 GRM6O15303 877 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 PLA2G4BP0C869 781 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 LAG3P18627 525 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 EFNA5P52803 228 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 AMHR2Q16671 573 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 LONRF3Q496Y0 759 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 UBXN11Q5T124 520 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 LRRC55Q6ZSA7 311 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 C1orf186Q6ZWK4 172 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 SPRYD3Q8NCJ5 442 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 RASSF8Q8NHQ8 419 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 LPPQ93052 612 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 ZNF396Q96N95 335 aaPredicted RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 MRPL9Q9BYD2 267 aaKnown RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 CSRNP2Q9H175 543 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 FZD8Q9H461 694 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 CWH43Q9H720 699 aa18.31■□□□□ 0.52
LINC00240-203ENST00000606878 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
LINC00240-203ENST00000606878 A0A1B0GUA9 196 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 ARF4P18085 180 aaPredicted RBP18.3■□□□□ 0.52
LINC00240-203ENST00000606878 GRIN1Q05586 938 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 SLC39A14Q15043 492 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 MAPK6Q16659 721 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 FAM187BQ17R55 369 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 TMEM119Q4V9L6 283 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 CDCA2Q69YH5 1023 aaPredicted RBP18.3■□□□□ 0.52
LINC00240-203ENST00000606878 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 DRC1Q96MC2 740 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 USP28Q96RU2 1077 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms