RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MOGQ16653 247 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 PHKG1Q16816 387 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 KLHL38Q2WGJ6 581 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ODF2Q5BJF6 829 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 CCDC129Q6ZRS4 1044 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GALNT7Q86SF2 657 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 IFT20Q8IY31 132 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 AGGF1Q8N302 714 aaeCLIP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ELMOD1Q8N336 334 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 HERVK_113Q902F9 699 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 FAM20AQ96MK3 541 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 RBM14Q96PK6 669 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 NEURL2Q9BR09 285 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GPATCH1Q9BRR8 931 aaKnown RBP9.49□□□□□ -0.89
COMMD3-215ENST00000602574 CCDC134Q9H6E4 229 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 C12orf4Q9NQ89 552 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 SFMBT1Q9UHJ3 866 aa9.49□□□□□ -0.89
COMMD3-215ENST00000602574 GNPATO15228 680 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 TOMM70O94826 608 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PRKAR1BP31321 381 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 IFNA8P32881 189 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 RXRGP48443 463 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 HSP90AA5PQ58FG0 334 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 HERC4Q5GLZ8 1057 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ALKBH2Q6NS38 261 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 DSTYKQ6XUX3 929 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 MMAAQ8IVH4 418 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ATP6V0D2Q8N8Y2 350 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 EIF1ADQ8N9N8 165 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 EXD1Q8NHP7 514 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PIP4K2CQ8TBX8 421 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ARHGEF2Q92974 986 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CCDC51Q96ER9 411 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 SGF29Q96ES7 293 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 MRPL9Q9BYD2 267 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CAAP1Q9H8G2 361 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 KMT5AQ9NQR1 393 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 C8orf4Q9NR00 106 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 MTRF1LQ9UGC7 380 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PALD1Q9ULE6 856 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ZMYND8Q9ULU4 1186 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ERVK-11Q9UQG0 969 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 IFT52Q9Y366 437 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ACEP12821 1306 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 B8ZZF3 427 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 SLC22A1O15245 554 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CSPG5O95196 566 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 FYNP06241 537 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CALM1P0DP23 149 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CALM2P0DP24 149 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CALM3P0DP25 149 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PPARGP37231 505 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 SLC1A1P43005 524 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 RPL26P61254 145 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 DHX9Q08211 1270 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 METTL11BQ5VVY1 283 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 NIPAL1Q6NVV3 410 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 UNC5DQ6UXZ4 953 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 AGMOQ6ZNB7 445 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 RIBC1Q8N443 379 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 ENAHQ8N8S7 591 aaPredicted RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 TBC1D20Q96BZ9 403 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 INTS12Q96CB8 462 aaKnown RBP9.48□□□□□ -0.89
COMMD3-215ENST00000602574 CEP95Q96GE4 821 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 GGNBP2Q9H3C7 697 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 GMIPQ9P107 970 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 PCDHGA11Q9Y5H2 935 aa9.48□□□□□ -0.89
COMMD3-215ENST00000602574 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 GOLGA8IPA6NC78 632 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 GCOM1H8Y6P7 765 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 RPN1P04843 607 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SFTPCP11686 197 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 VCLP18206 1134 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 PCYT1AP49585 367 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 OLR1P78380 273 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 CETN1Q12798 172 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 UBE3CQ15386 1083 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ERMARDQ5T6L9 678 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 FAM171BQ6P995 826 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 C4orf22Q6V702 233 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 KIF6Q6ZMV9 814 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF317Q96PQ6 595 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MRPL1Q9BYD6 325 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms