RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ADGRL2O95490 1459 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PRKAB2O43741 272 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PDE8BO95263 885 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 HOXA13P31271 388 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 TTI1O43156 1089 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 RCN1Q15293 331 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 UBE3CQ15386 1083 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PTGISQ16647 500 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 DDHD1Q8NEL9 900 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PARVGQ9HBI0 331 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 USP21Q9UK80 565 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ZNF18P17022 549 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 INPP5DQ92835 1189 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MS4A14Q96JA4 679 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 CLRN2A0PK11 232 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MED7O43513 233 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PHKG2P15735 406 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ARL4AP40617 200 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 DYNLL1P63167 89 aaKnown RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 DPP9Q86TI2 863 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 USP15Q9Y4E8 981 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 TARSL2A2RTX5 802 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 KRT7P08729 469 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PSMA2P25787 234 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 KDM6BO15054 1643 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 LARGE1O95461 756 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 MTF1Q14872 753 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 LCORLQ8N3X6 602 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 H3BQF6 201 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 COPEO14579 308 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ZBED1O96006 694 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 THOC5Q13769 683 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 COA7Q96BR5 231 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 EDEM3Q9BZQ6 932 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 CDO1Q16878 200 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 COG4Q9H9E3 785 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 KCTD2Q14681 263 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ZNF507Q8TCN5 953 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 NR1H4Q96RI1 486 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 DIABLOQ9NR28 239 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 AURKCQ9UQB9 309 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ATP10AO60312 1499 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PRR23D1E9PI22 279 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 APBA3O96018 575 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 PRR23D2P0DMB1 279 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 SCTRP47872 440 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 FSCBQ5H9T9 825 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 C7orf31Q8N865 590 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 SMARCAL1Q9NZC9 954 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 L3MBTL1Q9Y468 752 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ZBED6P86452 979 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 AIFM3Q96NN9 605 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 MRPL47Q9HD33 250 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 SEMA3EO15041 775 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 KPNA2P52292 529 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 CDR2LQ86X02 465 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 CEP170P1Q96L14 293 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 GLE1Q53GS7 698 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 STAG2Q8N3U4 1231 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 LINC00301Q8NCQ3 95 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
CSMD1-216ENST00000602557 ABHD10Q9NUJ1 306 aa9.24□□□□□ -0.93
CSMD1-216ENST00000602557 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 BLVRAP53004 296 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 RWDD4Q6NW29 188 aaKnown RBP9.23□□□□□ -0.93
CSMD1-216ENST00000602557 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 PNMA2Q9UL42 364 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 ZFYVE16Q7Z3T8 1539 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 SFR1Q86XK3 245 aa9.23□□□□□ -0.93
CSMD1-216ENST00000602557 RNF14Q9UBS8 474 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms