RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ESPNB1AK53 854 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ZBTB42B2RXF5 422 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 BAIAP3O94812 1187 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 PSAPP07602 524 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 INSRRP14616 1297 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ZNF131P52739 623 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 MGAT3Q09327 533 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 TCTN1Q2MV58 587 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 HERC4Q5GLZ8 1057 aaPredicted RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 MIS18BP1Q6P0N0 1132 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 RUFY4Q6ZNE9 571 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 OTOP2Q7RTS6 562 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 DEFB128Q7Z7B8 93 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ATP8B4Q8TF62 1192 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 TSG101Q99816 390 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 MTIF3Q9H2K0 278 aaKnown RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 BHMT2Q9H2M3 363 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 SAMSN1Q9NSI8 373 aaKnown RBP12.7□□□□□ -0.38
ZNF548-211ENST00000600927 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 TET1Q8NFU7 2136 aa12.7□□□□□ -0.38
ZNF548-211ENST00000600927 COL1A2P08123 1366 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 PTPRSQ13332 1948 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 RRN3P2A6NIE6 340 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
ZNF548-211ENST00000600927 GNA14O95837 355 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
ZNF548-211ENST00000600927 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 THPOP40225 353 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 CYP4A11Q02928 519 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 ALCAMQ13740 583 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 BMT2Q1RMZ1 405 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 FAM160B1Q5W0V3 765 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
ZNF548-211ENST00000600927 UBE4BO95155 1302 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 COL6A3P12111 3177 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 ARHGEF35A5YM69 484 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 CHMP2AO43633 222 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 NRDCO43847 1150 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 ZNF862O60290 1169 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 HBP1O60381 514 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TPM2P07951 284 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 SCP2P22307 547 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 DNAJB2P25686 324 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 MSNP26038 577 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 ABCD1P33897 745 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 STX17P56962 302 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 NFIL3Q16649 462 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 Q7L0L9 218 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 CCDC186Q7Z3E2 898 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 VSTM4Q8IW00 320 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 IQCDQ96DY2 449 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 OSBPL7Q9BZF2 842 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 C17orf75Q9HAS0 396 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 PARVGQ9HBI0 331 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
ZNF548-211ENST00000600927 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
ZNF548-211ENST00000600927 WDR81Q562E7 1941 aa12.67□□□□□ -0.38
ZNF548-211ENST00000600927 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
ZNF548-211ENST00000600927 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms