RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TMEM87AQ8NBN3 555 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 SPIRE2Q8WWL2 714 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 DDX12PQ92771 950 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 KCNN1Q92952 543 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 KIFC3Q9BVG8 833 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 INO80BQ9C086 356 aaPredicted RBP15.2■□□□□ 0.02
VRK3-219ENST00000600137 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 RGS18Q9NS28 235 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 SERTAD1Q9UHV2 236 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 ODF2LQ9ULJ1 636 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 SLC4A7Q9Y6M7 1214 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 GBF1Q92538 1859 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 FRMD3A2A2Y4 597 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 LRRIQ4A6NIV6 560 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 SOX1O00570 391 aaPredicted RBP15.19■□□□□ 0.02
VRK3-219ENST00000600137 EFCAB14O75071 495 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 PLS3P13797 630 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 PHKA2P46019 1235 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 SNW1Q13573 536 aaKnown RBP15.19■□□□□ 0.02
VRK3-219ENST00000600137 FAM187BQ17R55 369 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
VRK3-219ENST00000600137 PPP4R3CPQ6ZMV5 832 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 DYMQ7RTS9 669 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 MRPS27Q92552 414 aaKnown RBP15.19■□□□□ 0.02
VRK3-219ENST00000600137 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 SCLT1Q96NL6 688 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 ADAM2Q99965 735 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 FTHL17Q9BXU8 183 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
VRK3-219ENST00000600137 SZT2Q5T011 3432 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 ZBBXA8MT70 800 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 B4GALT5O43286 388 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 TSPAN1O60635 241 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 CASP1P29466 404 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 ODR4Q5SWX8 454 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 CATSPER4Q7RTX7 472 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 FMR1NBQ8N0W7 255 aaPredicted RBP15.18■□□□□ 0.02
VRK3-219ENST00000600137 IFT74Q96LB3 600 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 C7orf25Q9BPX7 421 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 TRAIPQ9BWF2 469 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 STRA6Q9BX79 667 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 CHST12Q9NRB3 414 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 AGPAT5Q9NUQ2 364 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
VRK3-219ENST00000600137 CHD7Q9P2D1 2997 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 INO80B-WBP1J3KQ70 363 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 ATP2A2P16615 1042 aaKnown RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 ATF7P17544 494 aaPredicted RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 ARF4P18085 180 aaPredicted RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 SFPQP23246 707 aaKnown RBP eCLIP15.17■□□□□ 0.02
VRK3-219ENST00000600137 SYKP43405 635 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 NCKAP1LP55160 1127 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 PCBP1Q15365 356 aaKnown RBP eCLIP15.17■□□□□ 0.02
VRK3-219ENST00000600137 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 ZNF598Q86UK7 904 aaKnown RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 HERC6Q8IVU3 1022 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 GRAMD1CQ8IYS0 662 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
VRK3-219ENST00000600137 RC3H2Q9HBD1 1191 aaKnown RBP15.17■□□□□ 0.02
VRK3-219ENST00000600137 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 A0A1B0GUA9 196 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 CCDC169A6NNP5 214 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 ACKR2O00590 384 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 SLC16A4O15374 487 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 KLRC4O43908 158 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 ZNF202O95125 648 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 GJB5O95377 273 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 MAPTP10636 758 aaKnown RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 PBX2P40425 430 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 RABGGTBP53611 331 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 HTRA4P83105 476 aaPredicted RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 EHHADHQ08426 723 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 SLC24A5Q71RS6 500 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 CPB2Q96IY4 423 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 C2orf40Q9H1Z8 148 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 MTIF3Q9H2K0 278 aaKnown RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 MAGEF1Q9HAY2 307 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 KMT5AQ9NQR1 393 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 RNF19AQ9NV58 838 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms