RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 POLR3CQ9BUI4 534 aaPredicted RBP12.16□□□□□ -0.46
SIN3B-210ENST00000599880 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
SIN3B-210ENST00000599880 TLR9Q9NR96 1032 aa12.16□□□□□ -0.46
SIN3B-210ENST00000599880 CLDND1Q9NY35 253 aa12.16□□□□□ -0.46
SIN3B-210ENST00000599880 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
SIN3B-210ENST00000599880 GRXCR2A6NFK2 248 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 SPATA31C1P0DKV0 1188 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 ATP2B1P20020 1258 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 RPA1P27694 616 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 IRS1P35568 1242 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 LTBRP36941 435 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 PTENP60484 403 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 HAUS3Q68CZ6 603 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
SIN3B-210ENST00000599880 KCNT2Q6UVM3 1135 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 LRRC55Q6ZSA7 311 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 CATSPER3Q86XQ3 398 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
SIN3B-210ENST00000599880 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 NECAB3Q96P71 396 aaPredicted RBP12.15□□□□□ -0.46
SIN3B-210ENST00000599880 MINDY3Q9H8M7 445 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
SIN3B-210ENST00000599880 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
SIN3B-210ENST00000599880 DBR1Q9UK59 544 aaKnown RBP12.15□□□□□ -0.46
SIN3B-210ENST00000599880 CNTNAP2Q9UHC6 1331 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 H3BQ06 376 aaPredicted RBP12.14□□□□□ -0.47
SIN3B-210ENST00000599880 LAD1O00515 517 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 FSCN2O14926 492 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 MED24O75448 989 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 ERLIN2O94905 339 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 AXLP30530 894 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 HOXA11P31270 313 aaPredicted RBP12.14□□□□□ -0.47
SIN3B-210ENST00000599880 ARL2P36404 184 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 TECP42680 631 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
SIN3B-210ENST00000599880 ZNF174Q15697 407 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 ADGRD2Q7Z7M1 963 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 MCPH1Q8NEM0 835 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 CCDC51Q96ER9 411 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 PUF60Q9UHX1 559 aaKnown RBP12.14□□□□□ -0.47
SIN3B-210ENST00000599880 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 MYH11P35749 1972 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
SIN3B-210ENST00000599880 TBX10O75333 385 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 IL9P15248 144 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.47
SIN3B-210ENST00000599880 KRT17Q04695 432 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 ADAM15Q13444 863 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 CAPSQ13938 189 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 PDIA5Q14554 519 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 EP400NLQ6ZTU2 488 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
SIN3B-210ENST00000599880 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 SLC39A11Q8N1S5 342 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 CDCA3Q99618 268 aaPredicted RBP12.13□□□□□ -0.47
SIN3B-210ENST00000599880 RAB34Q9BZG1 259 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
SIN3B-210ENST00000599880 SPG21Q9NZD8 308 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
SIN3B-210ENST00000599880 TSPAN1O60635 241 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 CSPG5O95196 566 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NCLP19338 710 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 GLRA2P23416 452 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 PRPHP41219 470 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NRIP1P48552 1158 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 ALDH7A1P49419 539 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NDUFV1P49821 464 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 TOB1P50616 345 aaPredicted RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 ERVFC1P60507 584 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 DLX2Q07687 328 aaPredicted RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NCBP1Q09161 790 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
SIN3B-210ENST00000599880 RILPL1Q5EBL4 403 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 NOTUMQ6P988 496 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 ASAP3Q8TDY4 903 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 MICAL1Q8TDZ2 1067 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 LPPQ93052 612 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 MSLNLQ96KJ4 702 aa12.12□□□□□ -0.47
SIN3B-210ENST00000599880 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms