RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 PODNQ7Z5L7 613 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 PICK1Q9NRD5 415 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 TOPORSQ9NS56 1045 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 DAAM1Q9Y4D1 1078 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 CETN1Q12798 172 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 ORC1Q13415 861 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 C18orf8Q96DM3 657 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 ERVK-5Q9HDB9 667 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
ZNF544-213ENST00000599227 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
ZNF544-213ENST00000599227 GOLGA6L10A0A0M3HER8 536 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 FOXN3O00409 490 aaPredicted RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 CAND2O75155 1236 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ACSL3O95573 720 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 HOXD13P35453 343 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 DR1Q01658 176 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 UBAP2Q5T6F2 1119 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ARFGAP2Q8N6H7 521 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 DNAJC18Q9H819 358 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 BAIAP2L1Q9UHR4 511 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 LOC102724159A0A0B4J2E5 919 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PSMC2P35998 433 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ACOT2P49753 483 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 DYNLT1P63172 113 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 DLG4P78352 724 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 MYL7Q01449 175 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PWP2Q15269 919 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 RINT1Q6NUQ1 792 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ZSWIM2Q8NEG5 633 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 LNX1Q8TBB1 728 aaPredicted RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ISCUQ9H1K1 167 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 AZI2Q9H6S1 392 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 AIPL1Q9NZN9 384 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 MAGED2Q9UNF1 606 aaPredicted RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 MYO9BQ13459 2157 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 LCA5LO95447 670 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 RPSAP08865 295 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 CTNNA2P26232 953 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PPP1R7Q15435 360 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 FBXO25Q8TCJ0 367 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 KRT35Q92764 455 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PBKQ96KB5 322 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 TYW1Q9NV66 732 aaKnown RBP12.1□□□□□ -0.47
ZNF544-213ENST00000599227 RNF14Q9UBS8 474 aa12.1□□□□□ -0.47
ZNF544-213ENST00000599227 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 GMNCA6NCL1 334 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 HMGB1P1B2RPK0 211 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SHOX2O60902 331 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 IL1R1P14778 569 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SH3BP5LQ7L8J4 393 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 ELAC2Q9BQ52 826 aaKnown RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 ASTN1O14525 1302 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 HIP1RO75146 1068 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 ERFP50548 548 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 EPHA7Q15375 998 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 CACNA2D3Q8IZS8 1091 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 IL31RAQ8NI17 732 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 TAAR1Q96RJ0 339 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms