RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CA3P07451 260 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 ATF7P17544 494 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 NAMPTP43490 491 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 NPTX2P47972 431 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 SARSP49591 514 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 PEX3P56589 373 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 TFDP1Q14186 410 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 SLC24A5Q71RS6 500 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 TAS1R3Q7RTX0 852 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 CDR2LQ86X02 465 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 STAMQ92783 540 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 KIFAP3Q92845 792 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 TIFAQ96CG3 184 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 ZNF689Q96CS4 500 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 RAD9AQ99638 391 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 REEP2Q9BRK0 252 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 FZD8Q9H461 694 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 RC3H2Q9HBD1 1191 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 AGPAT5Q9NUQ2 364 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 PTPRSQ13332 1948 aa15.72■□□□□ 0.11
SHKBP1-217ENST00000598558 MEIS3P2A8K0S8 358 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 DGKIO75912 1065 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 SFPQP23246 707 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 TAP1Q03518 808 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 ODR4Q5SWX8 454 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 DNAJC19Q96DA6 116 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 ZBED2Q9BTP6 218 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 SEMA6BQ9H3T3 888 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 CHST12Q9NRB3 414 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 MSRAQ9UJ68 235 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 PIN4Q9Y237 131 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 ATP6V1DQ9Y5K8 247 aa15.71■□□□□ 0.11
SHKBP1-217ENST00000598558 MYH15Q9Y2K3 1946 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 COL4A6Q14031 1691 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 SZT2Q5T011 3432 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 A0A1B0GVL5 298 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 LINC00271P0C7V0 271 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 FGFR1P11362 822 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 ZSCAN20P17040 1043 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 ARF4P18085 180 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 TXLNAP40222 546 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 STAT6P42226 847 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 RAB30Q15771 203 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 TPRNQ4KMQ1 711 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 NT5DC1Q5TFE4 455 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 ADALQ6DHV7 355 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 CCDC73Q6ZRK6 1079 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 DYMQ7RTS9 669 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 NPAS4Q8IUM7 802 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 DEPTORQ8TB45 409 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 DHX58Q96C10 678 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 FIZ1Q96SL8 496 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 NTPCRQ9BSD7 190 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 EIF2AQ9BY44 585 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 GOLPH3LQ9H4A5 285 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 C1orf112Q9NSG2 853 aa15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-217ENST00000598558 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 LINC01553A4QN01 128 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 EPOPA6NHQ4 379 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 CCDC169A6NNP5 214 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 SLC16A4O15374 487 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 PLS3P13797 630 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 LIG1P18858 919 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 CMA1P23946 247 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 ZNF131P52739 623 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 GRIN2CQ14957 1233 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 FAM187BQ17R55 369 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 EEF1DP3Q658K8 133 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 DDX12PQ92771 950 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 LPPQ93052 612 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 IFT74Q96LB3 600 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 DRC1Q96MC2 740 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 SCAND2PQ9GZW5 306 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 ZNF576Q9H609 170 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 CERS4Q9HA82 394 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 KCND2Q9NZV8 630 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 ARHGAP28Q9P2N2 729 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 HCSTQ9UBK5 93 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 INSL6Q9Y581 213 aa15.69■□□□□ 0.1
SHKBP1-217ENST00000598558 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
SHKBP1-217ENST00000598558 RFXAPO00287 272 aa15.68■□□□□ 0.1
SHKBP1-217ENST00000598558 PRKCBP05771 671 aa15.68■□□□□ 0.1
SHKBP1-217ENST00000598558 PFKFB1P16118 471 aa15.68■□□□□ 0.1
SHKBP1-217ENST00000598558 CASP1P29466 404 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms