RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ZNF598Q86UK7 904 aaKnown RBP16.25■□□□□ 0.19
XRCC1-208ENST00000598422 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 ASAP3Q8TDY4 903 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 MINDY3Q9H8M7 445 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 DBR1Q9UK59 544 aaKnown RBP16.25■□□□□ 0.19
XRCC1-208ENST00000598422 INPP5FQ9Y2H2 1132 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 STK24Q9Y6E0 443 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-208ENST00000598422 LAD1O00515 517 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 DNAJB1P25685 340 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 TOB1P50616 345 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-208ENST00000598422 PTENP60484 403 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 PTGDRQ13258 359 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 CAPSQ13938 189 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 LONRF3Q496Y0 759 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 KCNT2Q6UVM3 1135 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 LPPQ93052 612 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
XRCC1-208ENST00000598422 IGFLR1Q9H665 355 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 CWH43Q9H720 699 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
XRCC1-208ENST00000598422 PCDHB2Q9Y5E7 798 aa16.24■□□□□ 0.19
XRCC1-208ENST00000598422 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.23■□□□□ 0.19
XRCC1-208ENST00000598422 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 MUTP22033 750 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 GLRA2P23416 452 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 IRS1P35568 1242 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 ARL2P36404 184 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 KRT17Q04695 432 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 RNASELQ05823 741 aaKnown RBP16.23■□□□□ 0.19
XRCC1-208ENST00000598422 HYAL1Q12794 435 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 PUS10Q3MIT2 529 aaKnown RBP16.23■□□□□ 0.19
XRCC1-208ENST00000598422 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 CCDC51Q96ER9 411 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 ENTPD7Q9NQZ7 604 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 FAM50BQ9Y247 325 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 VCANP13611 3396 aa16.23■□□□□ 0.19
XRCC1-208ENST00000598422 CARNS1A5YM72 827 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 TSPAN1O60635 241 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 ZNF623O75123 536 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 ZC3H11AO75152 810 aaKnown RBP eCLIP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 AXLP30530 894 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 PBX3P40426 434 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 PRPHP41219 470 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 ALDH7A1P49419 539 aaKnown RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 NDUFV1P49821 464 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 MBTD1Q05BQ5 628 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 CAMK1Q14012 370 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 NOMO2Q5JPE7 1267 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 PTCRAQ6ISU1 281 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 PDE12Q6L8Q7 609 aaKnown RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 NOTUMQ6P988 496 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 PADI6Q6TGC4 694 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 ZBTB8OSQ8IWT0 167 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 HACE1Q8IYU2 909 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 TRIM6Q9C030 488 aaPredicted RBP16.22■□□□□ 0.19
XRCC1-208ENST00000598422 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 TRANK1O15050 2925 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 EVPLQ92817 2033 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 RALGAPA2Q2PPJ7 1873 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 TTC28Q96AY4 2481 aa16.22■□□□□ 0.19
XRCC1-208ENST00000598422 CNTNAP2Q9UHC6 1331 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
XRCC1-208ENST00000598422 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 PDIA5Q14554 519 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 BMS1Q14692 1282 aaKnown RBP16.21■□□□□ 0.19
XRCC1-208ENST00000598422 COL19A1Q14993 1142 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 RBM23Q86U06 439 aaKnown RBP16.21■□□□□ 0.19
XRCC1-208ENST00000598422 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
XRCC1-208ENST00000598422 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 CPB2Q96IY4 423 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 BHMT2Q9H2M3 363 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 TLE6Q9H808 572 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 RSAD1Q9HA92 442 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.21■□□□□ 0.19
XRCC1-208ENST00000598422 KIAA1024Q9UPX6 916 aa16.21■□□□□ 0.19
XRCC1-208ENST00000598422 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 MEIS3P2A8K0S8 358 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 CYP11B2P19099 503 aa16.2■□□□□ 0.18
XRCC1-208ENST00000598422 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.18
XRCC1-208ENST00000598422 NRIP1P48552 1158 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms