RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 NFKBIZQ9BYH8 718 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 HCSTQ9UBK5 93 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 H3BNC9 293 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 TSPAN1O60635 241 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 EOMESO95936 686 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 TMEM119Q4V9L6 283 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 CLLU1OSQ5K130 101 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 UBXN11Q5T124 520 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 MICALL1Q8N3F8 863 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 LRRC15Q8TF66 581 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 RUSC1Q9BVN2 902 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 FAM105AQ9NUU6 356 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 ARID2Q68CP9 1835 aa25.27■■□□□ 1.64
IRF3-220ENST00000598108 LRRIQ4A6NIV6 560 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 C5orf67F2Z3F1 127 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 GTPBP6O43824 516 aaPredicted RBP25.26■■□□□ 1.63
IRF3-220ENST00000598108 LONP1P36776 959 aaKnown RBP25.26■■□□□ 1.63
IRF3-220ENST00000598108 GPM6BQ13491 265 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 PKP1Q13835 747 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 LONRF3Q496Y0 759 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 RINT1Q6NUQ1 792 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 LRRC55Q6ZSA7 311 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 C1orf186Q6ZWK4 172 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 TMEM117Q9H0C3 514 aa25.26■■□□□ 1.63
IRF3-220ENST00000598108 TYW1Q9NV66 732 aaKnown RBP25.26■■□□□ 1.63
IRF3-220ENST00000598108 FBXO2Q9UK22 296 aaPredicted RBP25.26■■□□□ 1.63
IRF3-220ENST00000598108 MEIS3P2A8K0S8 358 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 B4GALT5O43286 388 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 ZNF623O75123 536 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 RB1P06400 928 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 UBA7P41226 1012 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 SPECC1Q5M775 1068 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 CDCA2Q69YH5 1023 aaPredicted RBP25.25■■□□□ 1.63
IRF3-220ENST00000598108 USP49Q70CQ1 688 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 DAW1Q8N136 415 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 LPPQ93052 612 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 CPB2Q96IY4 423 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 CLIC6Q96NY7 704 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 NT5C3AQ9H0P0 336 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 CSRNP2Q9H175 543 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 PRDM6Q9NQX0 595 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 PCDHB2Q9Y5E7 798 aa25.25■■□□□ 1.63
IRF3-220ENST00000598108 ERLIN2O94905 339 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 SLC12A3P55017 1021 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 PCBP1Q15365 356 aaKnown RBP eCLIP25.24■■□□□ 1.63
IRF3-220ENST00000598108 KIFC3Q9BVG8 833 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 CWH43Q9H720 699 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 LMCD1Q9NZU5 365 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 TFIP11Q9UBB9 837 aaKnown RBP25.24■■□□□ 1.63
IRF3-220ENST00000598108 RWDD3Q9Y3V2 267 aa25.24■■□□□ 1.63
IRF3-220ENST00000598108 SRPRBQ9Y5M8 271 aaKnown RBP25.24■■□□□ 1.63
IRF3-220ENST00000598108 PRRC2BQ5JSZ5 2229 aaKnown RBP25.24■■□□□ 1.63
IRF3-220ENST00000598108 GRM6O15303 877 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 HOXA2O43364 376 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 SSBP05455 408 aaKnown RBP eCLIP25.23■■□□□ 1.63
IRF3-220ENST00000598108 PLA2G4BP0C869 781 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 ZSCAN22P10073 491 aaPredicted RBP25.23■■□□□ 1.63
IRF3-220ENST00000598108 ARF4P18085 180 aaPredicted RBP25.23■■□□□ 1.63
IRF3-220ENST00000598108 MAPK7Q13164 816 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 SLC39A14Q15043 492 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 KARSQ15046 597 aaKnown RBP25.23■■□□□ 1.63
IRF3-220ENST00000598108 KCTD17Q8N5Z5 321 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 SYT2Q8N9I0 419 aaPredicted RBP25.23■■□□□ 1.63
IRF3-220ENST00000598108 HELQQ8TDG4 1101 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 KIFAP3Q92845 792 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 EPSTI1Q96J88 318 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 CDK5RAP3Q96JB5 506 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 EIF2AQ9BY44 585 aaKnown RBP25.23■■□□□ 1.63
IRF3-220ENST00000598108 FZD8Q9H461 694 aa25.23■■□□□ 1.63
IRF3-220ENST00000598108 TTLL13PA6NNM8 815 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 SLC26A4O43511 780 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 HIP1RO75146 1068 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 SKIP12755 728 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 AXLP30530 894 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 NAMPTP43490 491 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 MRPL10Q7Z7H8 261 aaKnown RBP25.22■■□□□ 1.63
IRF3-220ENST00000598108 SLC17A8Q8NDX2 589 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 PLVAPQ9BX97 442 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 PLAGL2Q9UPG8 496 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 USP20Q9Y2K6 914 aa25.22■■□□□ 1.63
IRF3-220ENST00000598108 PLCG1P19174 1290 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 NASPP49321 788 aaPredicted RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 RAB27AP51159 221 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 NOTUMQ6P988 496 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 CDR2LQ86X02 465 aaPredicted RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 ABI1Q8IZP0 508 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 KLHL23Q8NBE8 558 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 SMG8Q8ND04 991 aaKnown RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 DEPTORQ8TB45 409 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 CALML4Q96GE6 196 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 IFT74Q96LB3 600 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 C11orf84Q9BUA3 381 aaPredicted RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 CCSER1Q9C0I3 900 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 CCDC113Q9H0I3 377 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 ALG13Q9NP73 1137 aaKnown RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 BLOC1S4Q9NUP1 217 aa25.21■■□□□ 1.63
IRF3-220ENST00000598108 MORC2Q9Y6X9 1032 aaPredicted RBP25.21■■□□□ 1.63
IRF3-220ENST00000598108 NPHP3-ACAD11A0A0J9YXS1 232 aa25.2■■□□□ 1.62
IRF3-220ENST00000598108 SFI1A8K8P3 1242 aa25.2■■□□□ 1.62
IRF3-220ENST00000598108 OFD1O75665 1012 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms