RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 CEP170P1Q96L14 293 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TRAIPQ9BWF2 469 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 CCNT1O60563 726 aaKnown RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 CDKL5O76039 1030 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 CTDNEP1O95476 244 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 CXCL14O95715 111 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 SRGAP2CP0DJJ0 459 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 HOXB8P17481 243 aaPredicted RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 MRE11P49959 708 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 IER5LQ5T953 404 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 PPP4R3AQ6IN85 833 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 KANK3Q6NY19 840 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 BMP8AQ7Z5Y6 402 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 C12orf76Q8N812 135 aaPredicted RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 PRPF31Q8WWY3 499 aaKnown RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 HAS1Q92839 578 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 CASP10Q92851 521 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 LXNQ9BS40 222 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 INO80BQ9C086 356 aaPredicted RBP11.79□□□□□ -0.52
LSM4-205ENST00000597776 ZBP1Q9H171 429 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 KCNH6Q9H252 994 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 POMKQ9H5K3 350 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 NRDE2Q9H7Z3 1164 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 AGPAT5Q9NUQ2 364 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 DNAJB4Q9UDY4 337 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 PCDHB2Q9Y5E7 798 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
LSM4-205ENST00000597776 ZBTB39O15060 712 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 PFKFB2O60825 505 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 OFD1O75665 1012 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 GALTP07902 379 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 SKIP12755 728 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 SLC11A1P49279 550 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 AFF1P51825 1210 aaKnown RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 PTPN21Q16825 1174 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 RARS2Q5T160 578 aaKnown RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 AGMOQ6ZNB7 445 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 ZNF280BQ86YH2 543 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 PRSS33Q8NF86 280 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 PSPC1Q8WXF1 523 aaKnown RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 ASIC4Q96FT7 647 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 IGSF21Q96ID5 467 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
LSM4-205ENST00000597776 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
LSM4-205ENST00000597776 C2CD4DB7Z1M9 353 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 MARCH6O60337 910 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 DKC1O60832 514 aaKnown RBP eCLIP11.77□□□□□ -0.53
LSM4-205ENST00000597776 ZNF623O75123 536 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 CTSAP10619 480 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 EPCAMP16422 314 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 XBP1P17861 261 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 HOXA11P31270 313 aaPredicted RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 YWHABP31946 246 aaKnown RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 RFC5P40937 340 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 RAB27AP51159 221 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 SPIRE1Q08AE8 756 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 NR5A1Q13285 461 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 CTTNQ14247 550 aaKnown RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 EMC2Q15006 297 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 EPHA7Q15375 998 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 UBXN11Q5T124 520 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 CES5AQ6NT32 575 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 ZBTB33Q86T24 672 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
LSM4-205ENST00000597776 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 NECAB1Q8N987 351 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.53
LSM4-205ENST00000597776 TBX3O15119 743 aa11.76□□□□□ -0.53
LSM4-205ENST00000597776 DDHD2O94830 711 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms