RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 IGSF9Q9P2J2 1179 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 LETM1O95202 739 aaPredicted RBP14.42□□□□□ -0.1
SCAF1-202ENST00000595242 DCNP07585 359 aaKnown RBP14.42□□□□□ -0.1
SCAF1-202ENST00000595242 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 SYNE3Q6ZMZ3 975 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 GPR149Q86SP6 731 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 CABP7Q86V35 215 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 C1orf210Q8IVY1 113 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 ABI1Q8IZP0 508 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 C8orf76Q96K31 380 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 SPATA32Q96LK8 384 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 ZNF396Q96N95 335 aaPredicted RBP14.42□□□□□ -0.1
SCAF1-202ENST00000595242 TBC1D17Q9HA65 648 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 CA14Q9ULX7 337 aa14.42□□□□□ -0.1
SCAF1-202ENST00000595242 MTCL1Q9Y4B5 1905 aaKnown RBP14.42□□□□□ -0.1
SCAF1-202ENST00000595242 FAM208BQ5VWN6 2430 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 CCDC196A0A1B0GTZ2 297 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.41□□□□□ -0.1
SCAF1-202ENST00000595242 HOXA2O43364 376 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 CYTH3O43739 400 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
SCAF1-202ENST00000595242 ITGB5P18084 799 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 KLRC1P26715 233 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 VARS2Q5ST30 1063 aaKnown RBP14.41□□□□□ -0.1
SCAF1-202ENST00000595242 ZNF654Q8IZM8 581 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 GPR161Q8N6U8 529 aaKnown RBP14.41□□□□□ -0.1
SCAF1-202ENST00000595242 SLC22A17Q8WUG5 538 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 RSAD2Q8WXG1 361 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 AUTS2Q8WXX7 1259 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 CUL5Q93034 780 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 NCDNQ9UBB6 729 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 RCOR1Q9UKL0 485 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 SIT1Q9Y3P8 196 aa14.41□□□□□ -0.1
SCAF1-202ENST00000595242 DCDC2BA2VCK2 349 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 DDAH1O94760 285 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 MTMR1Q13613 665 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 RTN1Q16799 776 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 LETM2Q2VYF4 491 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 PLPPR4Q7Z2D5 763 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 FAM228AQ86W67 206 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 KIAA0319LQ8IZA0 1049 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 VPS52Q8N1B4 723 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 WASF1Q92558 559 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
SCAF1-202ENST00000595242 DLGAP2Q9P1A6 1054 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 CDV3Q9UKY7 258 aaKnown RBP14.4□□□□□ -0.1
SCAF1-202ENST00000595242 DOCK6Q96HP0 2047 aa14.4□□□□□ -0.1
SCAF1-202ENST00000595242 SYCE3A1L190 88 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 NT5C1B-RDH14C9J2C7 533 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 MEIS2O14770 477 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 ADRB1P08588 477 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 CALM1P0DP23 149 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 CALM2P0DP24 149 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 CALM3P0DP25 149 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 ALDH7A1P49419 539 aaKnown RBP14.39□□□□□ -0.11
SCAF1-202ENST00000595242 STAT5BP51692 787 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 GIT2Q14161 759 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 DSC3Q14574 896 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 GRM4Q14833 912 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 NONOQ15233 471 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCAF1-202ENST00000595242 RAB11FIP4Q86YS3 637 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 TMEM169Q96HH4 297 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 OSMRQ99650 979 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 ZBP1Q9H171 429 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 RALYQ9UKM9 306 aaKnown RBP14.39□□□□□ -0.11
SCAF1-202ENST00000595242 IRAK3Q9Y616 596 aa14.39□□□□□ -0.11
SCAF1-202ENST00000595242 POTEMA6NI47 508 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 PRR5-ARHGAP8B1AHC4 643 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 YEATS4O95619 227 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 RXRAP19793 462 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 CRYBB1P53674 252 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-202ENST00000595242 BCAR1P56945 870 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 ARHGAP8P85298 464 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 SSRP1Q08945 709 aaKnown RBP14.38□□□□□ -0.11
SCAF1-202ENST00000595242 KIZQ2M2Z5 673 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 CLLU1OSQ5K130 101 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 PHLDB3Q6NSJ2 640 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 POTEGQ6S5H5 508 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-202ENST00000595242 SLC44A3Q8N4M1 653 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 FANCBQ8NB91 859 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 RNF169Q8NCN4 708 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 PGBD1Q96JS3 809 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 RTKNQ9BST9 563 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 MYL10Q9BUA6 226 aa14.38□□□□□ -0.11
SCAF1-202ENST00000595242 RNF26Q9BY78 433 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms