RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DTHD1Q6ZMT9 781 aa19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 ZNF598Q86UK7 904 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 IGSF22Q8N9C0 903 aa19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 RNF169Q8NCN4 708 aa19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 FAM105AQ9NUU6 356 aa19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 DAXXQ9UER7 740 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 PCDHB6Q9Y5E3 794 aa19.71■□□□□ 0.75
SHKBP1-204ENST00000594862 FSD2A1L4K1 749 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 TNFRSF10AO00220 468 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 GRM6O15303 877 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 USO1O60763 962 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 ARL2P36404 184 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 KRT79Q5XKE5 535 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 GLB1LQ6UWU2 654 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 BRAPQ7Z569 592 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 KCTD17Q8N5Z5 321 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 KLHL23Q8NBE8 558 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 CNNM3Q8NE01 707 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 CASD1Q96PB1 797 aa19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 UBE2ZQ9H832 354 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 TYW1Q9NV66 732 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 TCF20Q9UGU0 1960 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-204ENST00000594862 BMP15O95972 392 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 ITGB1P05556 798 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 NBR1Q14596 966 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 THNSL1Q8IYQ7 743 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 COLGALT1Q8NBJ5 622 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 ZNF558Q96NG5 402 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 POLR3FQ9H1D9 316 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 LZTS1Q9Y250 596 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 CNTNAP2Q9UHC6 1331 aa19.69■□□□□ 0.74
SHKBP1-204ENST00000594862 INO80B-WBP1J3KQ70 363 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 ATF7P17544 494 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 ATP2C1P98194 919 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 CAPSQ13938 189 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PPP2R5AQ15172 486 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PUS10Q3MIT2 529 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 TCEAL5Q5H9L2 206 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 CLLU1OSQ5K130 101 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 ARL6IP4Q66PJ3 421 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 NOTUMQ6P988 496 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PADI6Q6TGC4 694 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 HACE1Q8IYU2 909 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 SPPL3Q8TCT6 385 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 SNX29Q8TEQ0 813 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PABPC5Q96DU9 382 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 CWH43Q9H720 699 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 ALG13Q9NP73 1137 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 RNF19AQ9NV58 838 aa19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PUF60Q9UHX1 559 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-204ENST00000594862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 FGF18O76093 207 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 CYP11B2P19099 503 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 GLRA2P23416 452 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 PLCB3Q01970 1234 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 COL19A1Q14993 1142 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 ZBTB8OSQ8IWT0 167 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 URGCPQ8TCY9 931 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 HELQQ8TDG4 1101 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 ASAP3Q8TDY4 903 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 ADAMTS19Q8TE59 1207 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 POF1BQ8WVV4 589 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 INTS4Q96HW7 963 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 PRIMPOLQ96LW4 560 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 MINDY3Q9H8M7 445 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 UBN1Q9NPG3 1134 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 PCDHB2Q9Y5E7 798 aa19.67■□□□□ 0.74
SHKBP1-204ENST00000594862 SLC26A4O43511 780 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 TSPAN1O60635 241 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 TFF2Q03403 129 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 KRT17Q04695 432 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 MBTD1Q05BQ5 628 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 LEXMQ3ZCV2 418 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 KCNT2Q6UVM3 1135 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 KIFAP3Q92845 792 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 TLR9Q9NR96 1032 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 PRMT7Q9NVM4 692 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 DNM3Q9UQ16 869 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 FAM50BQ9Y247 325 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 ATG2AQ2TAZ0 1938 aa19.66■□□□□ 0.74
SHKBP1-204ENST00000594862 LRRIQ4A6NIV6 560 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 HOXA11P31270 313 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 NOMO2Q5JPE7 1267 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 CDCA2Q69YH5 1023 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 MRPL10Q7Z7H8 261 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 MRPS27Q92552 414 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 NT5C3AQ9H0P0 336 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 DDX19AQ9NUU7 478 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 SPG21Q9NZD8 308 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 KANSL3Q9P2N6 904 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 STK39Q9UEW8 545 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
SHKBP1-204ENST00000594862 BMP1P13497 986 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 NCLP19338 710 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 KCNA5P22460 613 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms