RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 GRASPQ7Z6J2 395 aaPredicted RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 VSIG10LQ86VR7 867 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 PPFIBP1Q86W92 1011 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 TMC8Q8IU68 726 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 SRRM1Q8IYB3 904 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 LRRC43Q8N309 656 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 LCORLQ8N3X6 602 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 ING5Q8WYH8 240 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 TBC1D5Q92609 795 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 FGF13Q92913 245 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 GPKOWQ92917 476 aaPredicted RBP eCLIP3.62□□□□□ -1.83
VRK3-204ENST00000593912 TAAR1Q96RJ0 339 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 CRNKL1Q9BZJ0 848 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 TMEM117Q9H0C3 514 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 NT5C3AQ9H0P0 336 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 CCDC8Q9H0W5 538 aaPredicted RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 ANTXR1Q9H6X2 564 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 ATP6V0A4Q9HBG4 840 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 POLMQ9NP87 494 aaPredicted RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 COL20A1Q9P218 1284 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 CDH7Q9ULB5 785 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 AKAP2Q9Y2D5 859 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 HEMK1Q9Y5R4 338 aaPredicted RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 PIAS3Q9Y6X2 628 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 VWA8A3KMH1 1905 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 MYH7P12883 1935 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 HELZP42694 1942 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 MTORP42345 2549 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 NIPBLQ6KC79 2804 aaeCLIP3.62□□□□□ -1.83
VRK3-204ENST00000593912 GON4LQ3T8J9 2241 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 DENND3A2RUS2 1198 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 UPK3BL1B0FP48 263 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 B4E1Z4 1266 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 UPK3BL2E5RIL1 263 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 PLK4O00444 970 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 MAN2B1O00754 1011 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 B4GALT3O60512 393 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ZC3H11AO75152 810 aaKnown RBP eCLIP3.61□□□□□ -1.83
VRK3-204ENST00000593912 RHOBTB1O94844 696 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ICAM1P05362 532 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 GNAT1P11488 350 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CD59P13987 128 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 RASA1P20936 1047 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 UBA1P22314 1058 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 MCCP23508 829 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 HOXA6P31267 233 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 GBP1P32455 592 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 SLC16A2P36021 539 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 SOX9P48436 509 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 IGBP1P78318 339 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 SEMG2Q02383 582 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CCDC173Q0VFZ6 552 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 BMS1Q14692 1282 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 SLFNL1Q499Z3 407 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CLLU1OSQ5K130 101 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CELF3Q5SZQ8 465 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 UTP14CQ5TAP6 766 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 ARHGAP40Q5TG30 622 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 C12orf60Q5U649 245 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ZNF787Q6DD87 383 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 TANGO2Q6ICL3 276 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 TOGARAM2Q6ZUX3 1019 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 TMPRSS7Q7RTY8 843 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CYP2U1Q7Z449 544 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 DDX53Q86TM3 631 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 FAM160B2Q86V87 743 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CERS3Q8IU89 383 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 GLYCTKQ8IVS8 523 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 RPAP2Q8IXW5 612 aaPredicted RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 CMTR1Q8N1G2 835 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 HDDC3Q8N4P3 179 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 RNF169Q8NCN4 708 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 DNERQ8NFT8 737 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 HELQQ8TDG4 1101 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CHURC1Q8WUH1 139 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 STAG1Q8WVM7 1258 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 TTC9Q92623 222 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 PIGKQ92643 395 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 MED8Q96G25 268 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CEP95Q96GE4 821 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 HHIPQ96QV1 700 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 MPHOSPH6Q99547 160 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 DBNDD2Q9BQY9 259 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 GTPBP2Q9BX10 602 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 EMILIN2Q9BXX0 1053 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 FAM117AQ9C073 453 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ARMT1Q9H993 441 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CPNE5Q9HCH3 593 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 COPRSQ9NQ92 184 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 RGS18Q9NS28 235 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 PLEKHB1Q9UF11 243 aaPredicted RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 MTMR7Q9Y216 660 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 TRPV2Q9Y5S1 764 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 PCDH15Q96QU1 1955 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ATXN2Q99700 1313 aaKnown RBP3.61□□□□□ -1.83
VRK3-204ENST00000593912 IGSF9BQ9UPX0 1349 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 ABCA2Q9BZC7 2435 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
VRK3-204ENST00000593912 MED13LQ71F56 2210 aa3.6□□□□□ -1.83
VRK3-204ENST00000593912 IGKV6D-41A0A0C4DH26 115 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms