RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 DACT2Q5SW24 774 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 CATSPER4Q7RTX7 472 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 FAM149B1Q96BN6 582 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 RUSC1Q9BVN2 902 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 FHOD1Q9Y613 1164 aa16.33■□□□□ 0.21
SYMPK-202ENST00000593504 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 BUB1BO60566 1050 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-202ENST00000593504 CDKAL1Q5VV42 579 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 C2orf69Q8N8R5 385 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 NUP85Q9BW27 656 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
SYMPK-202ENST00000593504 APEX2Q9UBZ4 518 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-202ENST00000593504 ZNF564Q8TBZ8 553 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-202ENST00000593504 STK33Q9BYT3 514 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 GPC3P51654 580 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 NNTQ13423 1086 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 NT5DC1Q5TFE4 455 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 ZNF526Q8TF50 670 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-202ENST00000593504 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 C11orf70Q9BRQ4 267 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 SNX12Q9UMY4 172 aa16.33■□□□□ 0.2
SYMPK-202ENST00000593504 COPB2P35606 906 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 EVX2Q03828 476 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 REXO1L1PQ8IX06 675 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 ZFPM1Q8IX07 1006 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 CALN1Q9BXU9 219 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 NACA2Q9H009 215 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 GRID2IPA4D2P6 1211 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 DMTNQ08495 405 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 ZNF211Q13398 564 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 LMBRD2Q68DH5 695 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 A0A1B0GUA9 196 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 NBPF9Q3BBW0 867 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 CEP57Q86XR8 500 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 NME8Q8N427 588 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 CALR3Q96L12 384 aaKnown RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 MOV10L1Q9BXT6 1211 aaKnown RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 UBE4BO95155 1302 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 ZNF185O15231 689 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 TBXAS1P24557 533 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 CXCL9Q07325 125 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 SEMA6BQ9H3T3 888 aa16.32■□□□□ 0.2
SYMPK-202ENST00000593504 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-202ENST00000593504 ZNF18P17022 549 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 TM4SF1P30408 202 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 ENOSF1Q7L5Y1 443 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 CACNA2D3Q8IZS8 1091 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 IDI2Q9BXS1 227 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 GGPS1O95749 300 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
SYMPK-202ENST00000593504 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■□□ 16.8
SYMPK-202ENST00000593504 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
SYMPK-202ENST00000593504 POC1B-GALNT4F8VUJ3 575 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 CYP26A1O43174 497 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 Q4G0T1 1027 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 CCDC117Q8IWD4 279 aaPredicted RBP16.31■□□□□ 0.2
SYMPK-202ENST00000593504 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 PLSCR1O15162 318 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 ERVK-24P63145 666 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 SLMAPQ14BN4 828 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 CYP4F22Q6NT55 531 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
SYMPK-202ENST00000593504 ARP10275 920 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 VEGFAP15692 232 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 GNA15P30679 374 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 IFT122Q9HBG6 1241 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 SNX24Q9Y343 169 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 ESYT3A0FGR9 886 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 MCF2LO15068 1137 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 PSMA2P25787 234 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 NPEPPSP55786 919 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 PRKCEQ02156 737 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 CCDC110Q8TBZ0 833 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYMPK-202ENST00000593504 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
SYMPK-202ENST00000593504 I3L4J1 428 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms