RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 B4GALT3O60512 393 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 EPCAMP16422 314 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 PSMC5P62195 406 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 ITIH3Q06033 890 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 STK3Q13188 491 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 NONOQ15233 471 aaKnown RBP eCLIP18.35■□□□□ 0.53
LIG1-205ENST00000593425 RARS2Q5T160 578 aaKnown RBP18.35■□□□□ 0.53
LIG1-205ENST00000593425 KANK3Q6NY19 840 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 CATSPER4Q7RTX7 472 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 KREMEN2Q8NCW0 462 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 IGSF21Q96ID5 467 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 NECTIN4Q96NY8 510 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 PRRX2Q99811 253 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
LIG1-205ENST00000593425 IFT122Q9HBG6 1241 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 DNAJB4Q9UDY4 337 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 VAV3Q9UKW4 847 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
LIG1-205ENST00000593425 OFD1O75665 1012 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 GALTP07902 379 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 CTSAP10619 480 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 AVPR2P30518 371 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 NPEPPSP55786 919 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 NOMO2Q5JPE7 1267 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 GLB1LQ6UWU2 654 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 DDX53Q86TM3 631 aaKnown RBP18.34■□□□□ 0.53
LIG1-205ENST00000593425 ZNF579Q8NAF0 562 aaKnown RBP18.34■□□□□ 0.53
LIG1-205ENST00000593425 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
LIG1-205ENST00000593425 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 SMOC2Q9H3U7 446 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 CYP26B1Q9NR63 512 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 AGPAT5Q9NUQ2 364 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 FAM86C1Q9NVL1 165 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 WRAP73Q9P2S5 460 aaPredicted RBP18.34■□□□□ 0.53
LIG1-205ENST00000593425 IRAK3Q9Y616 596 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
LIG1-205ENST00000593425 ZNF623O75123 536 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 BRD1O95696 1058 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 SKIP12755 728 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 MTHFRP42898 656 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 SLC11A1P49279 550 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 RAB27AP51159 221 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.52
LIG1-205ENST00000593425 PPP2R5CQ13362 524 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 BMS1Q14692 1282 aaKnown RBP18.33■□□□□ 0.52
LIG1-205ENST00000593425 LETM2Q2VYF4 491 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 AGMOQ6ZNB7 445 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 SLC22A17Q8WUG5 538 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 RSPH1Q8WYR4 309 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 GBP3Q9H0R5 595 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 KCNMB3Q9NPA1 279 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 DZANK1Q9NVP4 752 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 COL4A3BPQ9Y5P4 624 aa18.33■□□□□ 0.52
LIG1-205ENST00000593425 C2orf16Q68DN1 1984 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 DTNBO60941 627 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 ASGR2P07307 311 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 QARSP47897 775 aaKnown RBP18.32■□□□□ 0.52
LIG1-205ENST00000593425 AFF1P51825 1210 aaKnown RBP18.32■□□□□ 0.52
LIG1-205ENST00000593425 RNASELQ05823 741 aaKnown RBP18.32■□□□□ 0.52
LIG1-205ENST00000593425 MTMR3Q13615 1198 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 ZNF280BQ86YH2 543 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 JPH2Q9BR39 696 aaPredicted RBP18.32■□□□□ 0.52
LIG1-205ENST00000593425 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
LIG1-205ENST00000593425 PCDHB2Q9Y5E7 798 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
LIG1-205ENST00000593425 PLXNA3P51805 1871 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 DDHD2O94830 711 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 GIT2Q14161 759 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 PTPN14Q15678 1187 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 FAM177A1Q8N128 213 aaPredicted RBP18.31■□□□□ 0.52
LIG1-205ENST00000593425 TMEM143Q96AN5 459 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 CEP170P1Q96L14 293 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 DHX33Q9H6R0 707 aaKnown RBP18.31■□□□□ 0.52
LIG1-205ENST00000593425 GJB4Q9NTQ9 266 aa18.31■□□□□ 0.52
LIG1-205ENST00000593425 CCDC194A0A1B0GVG4 234 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 CARNS1A5YM72 827 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
LIG1-205ENST00000593425 SCRN1Q12765 414 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 UBXN11Q5T124 520 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
LIG1-205ENST00000593425 NEK8Q86SG6 692 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 UBALD2Q8IYN6 164 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
LIG1-205ENST00000593425 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 PRPF31Q8WWY3 499 aaKnown RBP18.3■□□□□ 0.52
LIG1-205ENST00000593425 SLC7A3Q8WY07 619 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 HAS1Q92839 578 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 PGBD4Q96DM1 585 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 FAM20AQ96MK3 541 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
LIG1-205ENST00000593425 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
LIG1-205ENST00000593425 DBR1Q9UK59 544 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms