RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RAG1P15918 1043 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 SCP2P22307 547 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 EEF1GP26641 437 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 MARK3P27448 753 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 CDC25BP30305 580 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 HOXD13P35453 343 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 SMTNP53814 917 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 NCKAP1LP55160 1127 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 PEX3P56589 373 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 UBASH3AP57075 661 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 GTF2BQ00403 316 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 FKBP3Q00688 224 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 EDRF1Q3B7T1 1238 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 FAM114A1Q8IWE2 563 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 NELFCDQ8IXH7 590 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 HVCN1Q96D96 273 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 IFT74Q96LB3 600 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 RNPEPQ9H4A4 650 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 TUT1Q9H6E5 874 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 TYW1Q9NV66 732 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 IFNKQ9P0W0 207 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 LIMA1Q9UHB6 759 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 MUC3AQ02505 3323 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 ZBTB42B2RXF5 422 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 H0YCG3 227 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 CALUO43852 315 aaPredicted RBP14.8□□□□□ -0.04
VMP1-217ENST00000593168 ABCD1P33897 745 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 NPTX2P47972 431 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 CPT1AP50416 773 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 FPGSQ05932 587 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 TBC1D8BQ0IIM8 1120 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 DMP1Q13316 513 aaPredicted RBP14.8□□□□□ -0.04
VMP1-217ENST00000593168 PPP2R5AQ15172 486 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 NFIL3Q16649 462 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 TCP11X2Q5H9J9 407 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 IER5Q5VY09 327 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 APTXQ7Z2E3 356 aaKnown RBP14.8□□□□□ -0.04
VMP1-217ENST00000593168 HAUS6Q7Z4H7 955 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 RNF180Q86T96 592 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 ZC3H3Q8IXZ2 948 aaKnown RBP14.8□□□□□ -0.04
VMP1-217ENST00000593168 ANKRD20A12PQ8NF67 263 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 TCP11Q8WWU5 503 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 CEP63Q96MT8 703 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
VMP1-217ENST00000593168 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 COL1A2P08123 1366 aa14.8□□□□□ -0.04
VMP1-217ENST00000593168 KCNJ18B7U540 433 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 K7ENM7 598 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 MAGEB2O15479 319 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 KPNA6O60684 536 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 TPM3P06753 285 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 DNAJB2P25686 324 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 SNRPFP62306 86 aaKnown RBP14.79□□□□□ -0.04
VMP1-217ENST00000593168 NKX3-2P78367 333 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 FAAP100Q0VG06 881 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 KCNJ12Q14500 433 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 ZC2HC1CQ53FD0 456 aaPredicted RBP14.79□□□□□ -0.04
VMP1-217ENST00000593168 HSP90AA4PQ58FG1 418 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 FILIP1Q7Z7B0 1213 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 GOLGA5Q8TBA6 731 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 BSNDQ8WZ55 320 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
VMP1-217ENST00000593168 KMT5AQ9NQR1 393 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 TMEM39AQ9NV64 488 aa14.79□□□□□ -0.04
VMP1-217ENST00000593168 MAGEC2Q9UBF1 373 aaPredicted RBP14.79□□□□□ -0.04
VMP1-217ENST00000593168 A0A1B0GTH6 734 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.78□□□□□ -0.04
VMP1-217ENST00000593168 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.78□□□□□ -0.04
VMP1-217ENST00000593168 CCDC169A6NNP5 214 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 TGFB1I1O43294 461 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 GNA14O95837 355 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 ZNF286BP0CG31 522 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 INSRRP14616 1297 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 RPL13P26373 211 aaKnown RBP14.78□□□□□ -0.04
VMP1-217ENST00000593168 GJA9P57773 515 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 KCNA1Q09470 495 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 MYBPC2Q14324 1141 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 NR1I3Q14994 352 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 FILIP1LQ4L180 1135 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 TJAP1Q5JTD0 557 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 HS2ST1Q7LGA3 356 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 TMEM174Q8WUU8 243 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 TMEM143Q96AN5 459 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 ACCSQ96QU6 501 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 GBP3Q9H0R5 595 aa14.78□□□□□ -0.04
VMP1-217ENST00000593168 CGNQ9P2M7 1197 aaKnown RBP14.78□□□□□ -0.04
VMP1-217ENST00000593168 TTC28Q96AY4 2481 aa14.77□□□□□ -0.04
VMP1-217ENST00000593168 CETN3O15182 167 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 SLC16A4O15374 487 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 F2P00734 622 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 GLRA2P23416 452 aa14.77□□□□□ -0.05
VMP1-217ENST00000593168 NAMPTP43490 491 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms