RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GLB1LQ6UWU2 654 aa20.06■□□□□ 0.8
CIRBP-243ENST00000593128 SLC39A11Q8N1S5 342 aa20.06■□□□□ 0.8
CIRBP-243ENST00000593128 PRPF31Q8WWY3 499 aaKnown RBP20.06■□□□□ 0.8
CIRBP-243ENST00000593128 PSPC1Q8WXF1 523 aaKnown RBP20.06■□□□□ 0.8
CIRBP-243ENST00000593128 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
CIRBP-243ENST00000593128 NGRNQ9NPE2 291 aaKnown RBP20.06■□□□□ 0.8
CIRBP-243ENST00000593128 FAM105AQ9NUU6 356 aa20.06■□□□□ 0.8
CIRBP-243ENST00000593128 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
CIRBP-243ENST00000593128 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 SKIP12755 728 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 SP100P23497 879 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-243ENST00000593128 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
CIRBP-243ENST00000593128 TRIM29Q14134 588 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 SMC1AQ14683 1233 aaKnown RBP20.05■□□□□ 0.8
CIRBP-243ENST00000593128 EPHA7Q15375 998 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 ME3Q16798 604 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 OTUD6AQ7L8S5 288 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 TPH2Q8IWU9 490 aa20.05■□□□□ 0.8
CIRBP-243ENST00000593128 MEIS3P2A8K0S8 358 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 TBX3O15119 743 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 RFC5P40937 340 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 NEK4P51957 841 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 BMS1Q14692 1282 aaKnown RBP20.04■□□□□ 0.8
CIRBP-243ENST00000593128 EMC2Q15006 297 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 ANKRD54Q6NXT1 300 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 SLFN12Q8IYM2 578 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
CIRBP-243ENST00000593128 CCDC43Q96MW1 224 aaKnown RBP20.04■□□□□ 0.8
CIRBP-243ENST00000593128 PHF7Q9BWX1 381 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-243ENST00000593128 ZBTB39O15060 712 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 JAK2O60674 1132 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 CXCL14O95715 111 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 FDPSP14324 419 aaKnown RBP20.03■□□□□ 0.8
CIRBP-243ENST00000593128 LAMTOR4Q0VGL1 99 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 CALCRLQ16602 461 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 HERC4Q5GLZ8 1057 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-243ENST00000593128 NOMO2Q5JPE7 1267 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 EXOC8Q8IYI6 725 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 AUTS2Q8WXX7 1259 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 PGBD4Q96DM1 585 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 ZSWIM4Q9H7M6 989 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 IFT122Q9HBG6 1241 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 AGPAT5Q9NUQ2 364 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 PCDHB2Q9Y5E7 798 aa20.03■□□□□ 0.8
CIRBP-243ENST00000593128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-243ENST00000593128 ATP2B1P20020 1258 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 RAB27AP51159 221 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 TMEM173Q86WV6 379 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-243ENST00000593128 C4orf19Q8IY42 314 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 VPS52Q8N1B4 723 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 RNF149Q8NC42 400 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 URGCPQ8TCY9 931 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 TCP11Q8WWU5 503 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 MTRQ99707 1265 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 DHX33Q9H6R0 707 aaKnown RBP20.02■□□□□ 0.8
CIRBP-243ENST00000593128 TBC1D13Q9NVG8 400 aa20.02■□□□□ 0.8
CIRBP-243ENST00000593128 C2orf71A6NGG8 1288 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 BTBD18B2RXH4 712 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 LOC730098B7Z3J9 87 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 OFD1O75665 1012 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 ERLIN2O94905 339 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 TXKP42681 527 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 CBX2Q14781 532 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 SYCE2Q6PIF2 218 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 HFE2Q6ZVN8 426 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 DIS3L2Q8IYB7 885 aaKnown RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 MRPL43Q8N983 215 aaKnown RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 NSUN7Q8NE18 718 aaKnown RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 CASP10Q92851 521 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 FAM193BQ96PV7 902 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 EIF2AK1Q9BQI3 630 aaKnown RBP20.01■□□□□ 0.79
CIRBP-243ENST00000593128 NRDE2Q9H7Z3 1164 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 MINDY3Q9H8M7 445 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 DNAJB4Q9UDY4 337 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 CDH22Q9UJ99 828 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 PCDHA12Q9UN75 941 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 PPME1Q9Y570 386 aa20.01■□□□□ 0.79
CIRBP-243ENST00000593128 NEMFO60524 1076 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 CLASP2O75122 1294 aaKnown RBP20■□□□□ 0.79
CIRBP-243ENST00000593128 SSBP05455 408 aaKnown RBP eCLIP20■□□□□ 0.79
CIRBP-243ENST00000593128 GUCY1B3Q02153 619 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 ZBTB33Q86T24 672 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 FERMT3Q86UX7 667 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 EDAQ92838 391 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 TRAIPQ9BWF2 469 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 TTC12Q9H892 705 aaPredicted RBP20■□□□□ 0.79
CIRBP-243ENST00000593128 HCFC2Q9Y5Z7 792 aa20■□□□□ 0.79
CIRBP-243ENST00000593128 A0A087WWV3 80 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 SPDYE4A6NLX3 237 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 GAS2O43903 313 aaKnown RBP19.99■□□□□ 0.79
CIRBP-243ENST00000593128 SLITRK3O94933 977 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 SLC11A1P49279 550 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 SPIRE1Q08AE8 756 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 TPRNQ4KMQ1 711 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 TMEM184AQ6ZMB5 413 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 ZNF280BQ86YH2 543 aa19.99■□□□□ 0.79
CIRBP-243ENST00000593128 BCL7CQ8WUZ0 217 aaPredicted RBP19.99■□□□□ 0.79
CIRBP-243ENST00000593128 SUSD6Q92537 303 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms