RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TMEM150BA6NC51 233 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 MARCH6O60337 910 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 POLGP54098 1239 aaPredicted RBP21.1■□□□□ 0.97
CCDC43-205ENST00000592333 PLPP4Q5VZY2 271 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 CATSPER4Q7RTX7 472 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 PSPC1Q8WXF1 523 aaKnown RBP21.1■□□□□ 0.97
CCDC43-205ENST00000592333 TMEM169Q96HH4 297 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 CEP170P1Q96L14 293 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 S1PR5Q9H228 398 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 AGPAT5Q9NUQ2 364 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 MUTYHQ9UIF7 546 aa21.1■□□□□ 0.97
CCDC43-205ENST00000592333 CSDE1O75534 798 aaKnown RBP21.09■□□□□ 0.97
CCDC43-205ENST00000592333 CTDNEP1O95476 244 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 YWHABP31946 246 aaKnown RBP21.09■□□□□ 0.97
CCDC43-205ENST00000592333 KRT2P35908 639 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 BCAR1P56945 870 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 SPIRE1Q08AE8 756 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 NLRP4Q96MN2 994 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 SH2D3AQ9BRG2 576 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 LXNQ9BS40 222 aa21.09■□□□□ 0.97
CCDC43-205ENST00000592333 CNTNAP2Q9UHC6 1331 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 HIDE1A8MVS5 230 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 LYPLA2O95372 231 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 TECP42680 631 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 AK2P54819 239 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 NPEPPSP55786 919 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 ITIH3Q06033 890 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 POU5F1BQ06416 359 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 NOMO2Q5JPE7 1267 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 MRPL10Q7Z7H8 261 aaKnown RBP21.08■□□□□ 0.97
CCDC43-205ENST00000592333 DDX53Q86TM3 631 aaKnown RBP21.08■□□□□ 0.97
CCDC43-205ENST00000592333 CNNM3Q8NE01 707 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 OXER1Q8TDS5 423 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 PRPF31Q8WWY3 499 aaKnown RBP21.08■□□□□ 0.97
CCDC43-205ENST00000592333 TNFRSF25Q93038 417 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 NECTIN4Q96NY8 510 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 PPP4R2Q9NY27 417 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 KANSL3Q9P2N6 904 aa21.08■□□□□ 0.97
CCDC43-205ENST00000592333 OFD1O75665 1012 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 FDPSP14324 419 aaKnown RBP21.07■□□□□ 0.96
CCDC43-205ENST00000592333 MXD4Q14582 209 aaPredicted RBP21.07■□□□□ 0.96
CCDC43-205ENST00000592333 PLA2G4FQ68DD2 849 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 SYCE2Q6PIF2 218 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 KSR1Q8IVT5 923 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 GTF3C6Q969F1 213 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 UBN1Q9NPG3 1134 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 TBC1D13Q9NVG8 400 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 PCDHA12Q9UN75 941 aa21.07■□□□□ 0.96
CCDC43-205ENST00000592333 AXLP30530 894 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 PBX3P40426 434 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 LAMTOR4Q0VGL1 99 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 FERMT3Q86UX7 667 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 IGSF21Q96ID5 467 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 ZBP1Q9H171 429 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 WRAP73Q9P2S5 460 aaPredicted RBP21.06■□□□□ 0.96
CCDC43-205ENST00000592333 PCDHB2Q9Y5E7 798 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 HCFC2Q9Y5Z7 792 aa21.06■□□□□ 0.96
CCDC43-205ENST00000592333 ZC3H11AO75152 810 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 SLITRK3O94933 977 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 CTSAP10619 480 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 XRCC6P12956 609 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 ZXDAP98168 799 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 RNASELQ05823 741 aaKnown RBP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 EMC2Q15006 297 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 ME3Q16798 604 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 CES5AQ6NT32 575 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 TRIM67Q6ZTA4 783 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 HFE2Q6ZVN8 426 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 IFNLR1Q8IU57 520 aaPredicted RBP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 VPS52Q8N1B4 723 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 URGCPQ8TCY9 931 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 CCDC51Q96ER9 411 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 HSD17B14Q9BPX1 270 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 TMEM175Q9BSA9 504 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 ADAM7Q9H2U9 754 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 NRDE2Q9H7Z3 1164 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 DZANK1Q9NVP4 752 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 DAXXQ9UER7 740 aaPredicted RBP21.05■□□□□ 0.96
CCDC43-205ENST00000592333 NR2E1Q9Y466 385 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 MUC6Q6W4X9 2439 aa21.05■□□□□ 0.96
CCDC43-205ENST00000592333 CLASP2O75122 1294 aaKnown RBP21.04■□□□□ 0.96
CCDC43-205ENST00000592333 CXCL14O95715 111 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 GALTP07902 379 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 HOXA11P31270 313 aaPredicted RBP21.04■□□□□ 0.96
CCDC43-205ENST00000592333 NCBP1Q09161 790 aaKnown RBP21.04■□□□□ 0.96
CCDC43-205ENST00000592333 XKR9Q5GH70 373 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 EARS2Q5JPH6 523 aaKnown RBP21.04■□□□□ 0.96
CCDC43-205ENST00000592333 NCAPH2Q6IBW4 605 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 PPFIBP1Q86W92 1011 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
CCDC43-205ENST00000592333 TMEM143Q96AN5 459 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 DYDC2Q96IM9 177 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 RPGRIP1Q96KN7 1286 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 MTRQ99707 1265 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 PRRX2Q99811 253 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
CCDC43-205ENST00000592333 GJB4Q9NTQ9 266 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms