RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-225	ENST00000592133	DARS	P14868	501 aa	Known RBP	13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	ATP4A	P20648	1035 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	SMARCA1	P28370	1054 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	PHKA2	P46019	1235 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	CEP55	Q53EZ4	464 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	TSSK4	Q6SA08	328 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	RALYL	Q86SE5	291 aa	Known RBP	13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	LRRC71	Q8N4P6	559 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	NLRP7	Q8WX94	980 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	LZTS2	Q9BRK4	669 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	RHOBTB2	Q9BYZ6	727 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	CEP131	Q9UPN4	1083 aa		13.74	□□□□□ -0.21
RANBP3-225	ENST00000592133	HIP1	O00291	1037 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	ALDH2	P05091	517 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	UROD	P06132	367 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	SPATA31D3	P0C874	917 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	SKI	P12755	728 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZNF76	P36508	570 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	MAGEA9	P43362	315 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	PRKCQ	Q04759	706 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	MLF2	Q15773	248 aa	Predicted RBP	13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	LPAL2	Q16609	132 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	SLC44A4	Q53GD3	710 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZBTB41	Q5SVQ8	909 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	TWF2	Q6IBS0	349 aa	Known RBP	13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	SPATA31D4	Q6ZUB0	917 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	MYL10	Q9BUA6	226 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	OSBPL6	Q9BZF3	934 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	CHST12	Q9NRB3	414 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	SSX2IP	Q9Y2D8	614 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	FAN1	Q9Y2M0	1017 aa		13.73	□□□□□ -0.21
RANBP3-225	ENST00000592133	C2orf16	Q68DN1	1984 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	hCG_1642624	A0A1W2PR95	340 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	TEX28	O15482	410 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	CSDE1	O75534	798 aa	Known RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	OFD1	O75665	1012 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	CD72	P21854	359 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	GNAQ	P50148	359 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	GPC3	P51654	580 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZNF280B	Q86YH2	543 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	CMTR1	Q8N1G2	835 aa	Known RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	URGCP	Q8TCY9	931 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZNF707	Q96C28	371 aa	Predicted RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	PGBD1	Q96JS3	809 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	FAM193B	Q96PV7	902 aa	Predicted RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	RPS6KC1	Q96S38	1066 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	MAP3K14	Q99558	947 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	RPP25	Q9BUL9	199 aa	Known RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	DDX23	Q9BUQ8	820 aa	Known RBP	13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	NT5C3A	Q9H0P0	336 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	TCEAL9	Q9UHQ7	104 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	EVPL	Q92817	2033 aa		13.72	□□□□□ -0.21
RANBP3-225	ENST00000592133	MEIS1	O00470	390 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	NCAM2	O15394	837 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	PLEKHA8P1	O95397	391 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	PARM1	Q6UWI2	310 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	HEATR3	Q7Z4Q2	680 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	PALB2	Q86YC2	1186 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZNF654	Q8IZM8	581 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	SRBD1	Q8N5C6	995 aa	Known RBP	13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	NCOA7	Q8NI08	942 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	NELL1	Q92832	810 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	FGF14	Q92915	247 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	LY9	Q9HBG7	655 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	LTB4R2	Q9NPC1	389 aa		13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.71	□□□□□ -0.21
RANBP3-225	ENST00000592133	MEIS3P2	A8K0S8	358 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	GAS2	O43903	313 aa	Known RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	B4GALT3	O60512	393 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	DDAH1	O94760	285 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	DDHD2	O94830	711 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	SOD2	P04179	222 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PSAP	P07602	524 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	HOXB3	P14651	431 aa	Predicted RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	FSHR	P23945	695 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PFKP	Q01813	784 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	LAIR1	Q6GTX8	287 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PLA2G4D	Q86XP0	818 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	CCDC82	Q8N4S0	544 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	LINC01465	Q8N7H1	131 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	HDAC7	Q8WUI4	952 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	DDX1	Q92499	740 aa	Known RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PGBD4	Q96DM1	585 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	NELL2	Q99435	816 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	TRAIP	Q9BWF2	469 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	LNPK	Q9C0E8	428 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PLEKHA4	Q9H4M7	779 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	FAM105A	Q9NUU6	356 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	GABBR1	Q9UBS5	961 aa		13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	PIN4	Q9Y237	131 aa	Known RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133		U3KPZ7	1027 aa	Predicted RBP	13.7	□□□□□ -0.22
RANBP3-225	ENST00000592133	NRP1	O14786	923 aa		13.69	□□□□□ -0.22
RANBP3-225	ENST00000592133	FOS	P01100	380 aa	Predicted RBP	13.69	□□□□□ -0.22
RANBP3-225	ENST00000592133	RET	P07949	1114 aa		13.69	□□□□□ -0.22
RANBP3-225	ENST00000592133	SFPQ	P23246	707 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	4e-6	■■■□□ 15
RANBP3-225	ENST00000592133	GLUD2	P49448	558 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms