RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 GLB1LQ6UWU2 654 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 B3GNT9Q6UX72 402 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 RHPN2Q8IUC4 686 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 RNF135Q8IUD6 432 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 HELQQ8TDG4 1101 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 GJA10Q969M2 543 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 PGBD4Q96DM1 585 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 TMEM169Q96HH4 297 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 MFSD14AQ96MC6 490 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 NLRP4Q96MN2 994 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 FDXACB1Q9BRP7 624 aaPredicted RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 PHF20Q9BVI0 1012 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 RNF19AQ9NV58 838 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 SUCLA2Q9P2R7 463 aaPredicted RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 MUTYHQ9UIF7 546 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 LOC730098B7Z3J9 87 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 PER2O15055 1255 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 SLC37A4O43826 429 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 EDIL3O43854 480 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 P4HBP07237 508 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 HOXB8P17481 243 aaPredicted RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 RFC5P40937 340 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 TECP42680 631 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 PHKA2P46019 1235 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 ANAPC15P60006 121 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 ERVFC1P60507 584 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 SCRN1Q12765 414 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 GIT2Q14161 759 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 CLLU1OSQ5K130 101 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 OTUD6AQ7L8S5 288 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 SLC39A11Q8N1S5 342 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 URGCPQ8TCY9 931 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 TCP11Q8WWU5 503 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
VMP1-214ENST00000592106 TRAIPQ9BWF2 469 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 STK39Q9UEW8 545 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 REV3LO60673 3130 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
VMP1-214ENST00000592106 MUC3AQ02505 3323 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 PFKFB2O60825 505 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 ZC3H11AO75152 810 aaKnown RBP eCLIP11.34□□□□□ -0.59
VMP1-214ENST00000592106 KRT2P35908 639 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 RNASELQ05823 741 aaKnown RBP11.34□□□□□ -0.59
VMP1-214ENST00000592106 DRP2Q13474 957 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
VMP1-214ENST00000592106 EPHA7Q15375 998 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 NPY5RQ15761 445 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 PLA2G4FQ68DD2 849 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 CES5AQ6NT32 575 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 ANKRD54Q6NXT1 300 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 LLGL2Q6P1M3 1020 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 TMEM184AQ6ZMB5 413 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 LRRC55Q6ZSA7 311 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 PIK3AP1Q6ZUJ8 805 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 EDAQ92838 391 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 KCNMB3Q9NPA1 279 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 FAM105AQ9NUU6 356 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
VMP1-214ENST00000592106 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 XIRP2A4UGR9 3374 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
VMP1-214ENST00000592106 TMEM150BA6NC51 233 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 ASAP2O43150 1006 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 STBD1O95210 358 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 PBX3P40426 434 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 BCAR1P56945 870 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 TRIM29Q14134 588 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 NOMO2Q5JPE7 1267 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 ANO5Q75V66 913 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 SUGP1Q8IWZ8 645 aaKnown RBP11.33□□□□□ -0.6
VMP1-214ENST00000592106 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 SUSD6Q92537 303 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 RPGRIP1Q96KN7 1286 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 NECTIN4Q96NY8 510 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 SH2D3AQ9BRG2 576 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 LXNQ9BS40 222 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 ZSWIM4Q9H7M6 989 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 DZANK1Q9NVP4 752 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 VAV3Q9UKW4 847 aa11.33□□□□□ -0.6
VMP1-214ENST00000592106 INPP5FQ9Y2H2 1132 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms