RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PABPC5Q96DU9 382 aaKnown RBP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 CASD1Q96PB1 797 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 CWH43Q9H720 699 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 WDR81Q562E7 1941 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLIP3-205ENST00000592017 IRS1P35568 1242 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 LTBRP36941 435 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 PDIA5Q14554 519 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 SF3A1Q15459 793 aaKnown RBP15.47■□□□□ 0.07
CLIP3-205ENST00000592017 ECM1Q16610 540 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 CTC1Q2NKJ3 1217 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 FAM173BQ6P4H8 233 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 CATSPER4Q7RTX7 472 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 RNF149Q8NC42 400 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 ASAP3Q8TDY4 903 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 POF1BQ8WVV4 589 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
CLIP3-205ENST00000592017 TMEM117Q9H0C3 514 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 POLR3FQ9H1D9 316 aaPredicted RBP15.47■□□□□ 0.07
CLIP3-205ENST00000592017 GPRC5CQ9NQ84 441 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 DBR1Q9UK59 544 aaKnown RBP15.47■□□□□ 0.07
CLIP3-205ENST00000592017 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 STK24Q9Y6E0 443 aa15.47■□□□□ 0.07
CLIP3-205ENST00000592017 EVPLQ92817 2033 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 BMP15O95972 392 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 XRCC6P12956 609 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 ATF7P17544 494 aaPredicted RBP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 MUTP22033 750 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 TFDP1Q14186 410 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 CLLU1OSQ5K130 101 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 SPOUT1Q5T280 376 aaKnown RBP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 FOXD4L5Q5VV16 416 aaPredicted RBP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 PADI6Q6TGC4 694 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 RNF169Q8NCN4 708 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 FOXD4L4Q8WXT5 416 aaPredicted RBP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 BHMT2Q9H2M3 363 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 IFT122Q9HBG6 1241 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 CHST12Q9NRB3 414 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 CLDND1Q9NY35 253 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 PIN4Q9Y237 131 aaKnown RBP15.46■□□□□ 0.07
CLIP3-205ENST00000592017 PCDHB12Q9Y5F1 795 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 PCDHGC5Q9Y5F6 944 aa15.46■□□□□ 0.07
CLIP3-205ENST00000592017 GRXCR2A6NFK2 248 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 ASAP2O43150 1006 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 PHKA2P46019 1235 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 CEBPZQ03701 1054 aaKnown RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 DLX2Q07687 328 aaPredicted RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 CAPSQ13938 189 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 MXD4Q14582 209 aaPredicted RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 ARL6IP4Q66PJ3 421 aaKnown RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 PTCRAQ6ISU1 281 aaPredicted RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 COLGALT1Q8NBJ5 622 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 CDK5RAP3Q96JB5 506 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 PLIN2Q99541 437 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 MMTAG2Q9BU76 263 aaKnown RBP15.45■□□□□ 0.06
CLIP3-205ENST00000592017 IGFLR1Q9H665 355 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 MINDY3Q9H8M7 445 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 CD320Q9NPF0 282 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 AAASQ9NRG9 546 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 ARID2Q68CP9 1835 aa15.45■□□□□ 0.06
CLIP3-205ENST00000592017 LRRIQ4A6NIV6 560 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 E9PMD0 336 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 LINC01565O15544 149 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 HOXA2O43364 376 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 NCK2O43639 380 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 FGF18O76093 207 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 EOMESO95936 686 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 IL9P15248 144 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 GLRA2P23416 452 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 ARL2P36404 184 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 ERVFC1P60507 584 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
CLIP3-205ENST00000592017 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 ADGRD2Q7Z7M1 963 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 DACT1Q9NYF0 836 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 DNM3Q9UQ16 869 aa15.44■□□□□ 0.06
CLIP3-205ENST00000592017 INO80B-WBP1J3KQ70 363 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 ERLIN2O94905 339 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 SSBP05455 408 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLIP3-205ENST00000592017 LAG3P18627 525 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 PBX3P40426 434 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 GRIN1Q05586 938 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 ADAM15Q13444 863 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 KCNK18Q7Z418 384 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 CABP7Q86V35 215 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 ABI1Q8IZP0 508 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 HELQQ8TDG4 1101 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 LPPQ93052 612 aa15.43■□□□□ 0.06
CLIP3-205ENST00000592017 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
CLIP3-205ENST00000592017 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms