RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ZIM3Q96PE6 472 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 PLEKHG4BQ96PX9 1271 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 IWS1Q96ST2 819 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 CDC5LQ99459 802 aaKnown RBP6.44□□□□□ -1.38
NPC1-213ENST00000591955 SLF1Q9BQI6 1058 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 RUSC1Q9BVN2 902 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 OSBPL7Q9BZF2 842 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 RAB17Q9H0T7 212 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 FOXP1Q9H334 677 aaPredicted RBP6.44□□□□□ -1.38
NPC1-213ENST00000591955 NDST4Q9H3R1 872 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 THAP9Q9H5L6 903 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 OSGEPQ9NPF4 335 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 GPR108Q9NPR9 543 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 C9orf78Q9NZ63 289 aaPredicted RBP6.44□□□□□ -1.38
NPC1-213ENST00000591955 NDUFA13Q9P0J0 144 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 MAGEC2Q9UBF1 373 aaPredicted RBP6.44□□□□□ -1.38
NPC1-213ENST00000591955 SLC12A6Q9UHW9 1150 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 CLIC4Q9Y696 253 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 ABCB11O95342 1321 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 NID2Q14112 1375 aa6.44□□□□□ -1.38
NPC1-213ENST00000591955 GPR75-ASB3A0A0A6YYF3 556 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CCDC169A6NNP5 214 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 LGALS16A8MUM7 142 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CCDC188H7C350 402 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 PLSCR1O15162 318 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 CEP104O60308 925 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 TMCC1O94876 653 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 SUN1O94901 812 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CYP21A2P08686 494 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 PDHBP11177 359 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 IDO1P14902 403 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CPA3P15088 417 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ZFXP17010 805 aaPredicted RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 ATP6V1C1P21283 382 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ATP5DP30049 168 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 HNRNPH3P31942 346 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 CTCFP49711 727 aaPredicted RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 COPB1P53618 953 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 EVA1CP58658 441 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 PAK1Q13153 545 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 PNOCQ13519 176 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CUL4BQ13620 913 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 MAP7Q14244 749 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 KPNB1Q14974 876 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 TTF1Q15361 905 aaPredicted RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 PARP6Q2NL67 630 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 TBC1D25Q3MII6 688 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 USH1GQ495M9 461 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ODF2Q5BJF6 829 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 SHC4Q6S5L8 630 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 TAOK1Q7L7X3 1001 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 APTXQ7Z2E3 356 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 RALYLQ86SE5 291 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CCDC65Q8IXS2 484 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 KBTBD3Q8NAB2 608 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 STKLD1Q8NE28 680 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 NGDNQ8NEJ9 315 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 LINS1Q8NG48 757 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ATL2Q8NHH9 583 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 NCOA7Q8NI08 942 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 HDAC7Q8WUI4 952 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 RIN2Q8WYP3 895 aaPredicted RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 IRGQQ8WZA9 623 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 OPTNQ96CV9 577 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 RRP36Q96EU6 259 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 TMEM87BQ96K49 555 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CCDC43Q96MW1 224 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 NOX5Q96PH1 765 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 SMC6Q96SB8 1091 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 POP1Q99575 1024 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 HAUS7Q99871 368 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 BHMT2Q9H2M3 363 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ZWILCHQ9H900 591 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 MAGEF1Q9HAY2 307 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 TXLNGQ9NUQ3 528 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 AATFQ9NY61 560 aaKnown RBP eCLIP6.43□□□□□ -1.38
NPC1-213ENST00000591955 ATXN10Q9UBB4 475 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 DBF4Q9UBU7 674 aaPredicted RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 SCOCQ9UIL1 159 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 WDR37Q9Y2I8 494 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 LRRC42Q9Y546 428 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 ASB3Q9Y575 518 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 SRPRBQ9Y5M8 271 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.43□□□□□ -1.38
NPC1-213ENST00000591955 MROH7-TTC4A0A0A0MT08 1334 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 IGSF1Q8N6C5 1336 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 CPDO75976 1380 aa6.43□□□□□ -1.38
NPC1-213ENST00000591955 PIK3C2AO00443 1686 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 BICDL2A1A5D9 508 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 GOLGA8BA8MQT2 603 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 SH2B2O14492 632 aaPredicted RBP6.42□□□□□ -1.38
NPC1-213ENST00000591955 BIRC5O15392 142 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 ZSCAN9O15535 394 aaPredicted RBP6.42□□□□□ -1.38
NPC1-213ENST00000591955 PJA2O43164 708 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 RNF8O76064 485 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 LCA5LO95447 670 aa6.42□□□□□ -1.38
NPC1-213ENST00000591955 FGFR1OPO95684 399 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms