RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ATG16L1Q676U5 607 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 ORC6Q9Y5N6 252 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 GUCY2CP25092 1073 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 CEP55Q53EZ4 464 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 SMYD4Q8IYR2 804 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 NOVA2Q9UNW9 492 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 GDAQ9Y2T3 454 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 ATP5HO75947 161 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 GPC3P51654 580 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 EPHB1P54762 984 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 EPHA7Q15375 998 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 FBXO38Q6PIJ6 1188 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 TTC39CQ8N584 583 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 POLR3FQ9H1D9 316 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 IQANK1A0A1B0GTG1 560 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 EXOC1LA0A1B0GW35 172 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 MAPK13O15264 365 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 DCTN3O75935 186 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 GGPS1O95749 300 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 NR1H3Q13133 447 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 TAF11Q15544 211 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 RAPH1Q70E73 1250 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 CHST13Q8NET6 341 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 FAM96AQ9H5X1 160 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 VEPH1Q14D04 833 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 CYP4F22Q6NT55 531 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 SMARCAD1Q9H4L7 1026 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 SCINQ9Y6U3 715 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 SLC16A4O15374 487 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 KRT31Q15323 416 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 GRAMD1CQ8IYS0 662 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 TLK1Q9UKI8 766 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 ZMYND10O75800 440 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 GFPT2O94808 682 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 ACTN1P12814 892 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 PEX19P40855 299 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 EFNA5P52803 228 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 ZNF699Q32M78 642 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 CENPUQ71F23 418 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 LXNQ9BS40 222 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 MAGEA9P43362 315 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 RWDD2BP57060 319 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 PHEXP78562 749 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 KRT39Q6A163 491 aa14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 GBA2Q9HCG7 927 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-216ENST00000591545 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 ERICH1Q86X53 443 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 PROM2Q8N271 834 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 SEPT1Q8WYJ6 367 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 PFDN1O60925 122 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 CAV1Q03135 178 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 PGBD4Q96DM1 585 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 NOP53Q9NZM5 478 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 SYNGAP1Q96PV0 1343 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 UBE2Q2LH0YL09 131 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 COBLO75128 1261 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 TERF2Q15554 542 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 IER5Q5VY09 327 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 HIBCHQ6NVY1 386 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 ALKBH5Q6P6C2 394 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 PDIK1LQ8N165 341 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 RAD54LQ92698 747 aa14.22□□□□□ -0.13
SMARCA4-216ENST00000591545 E2F5Q15329 346 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 BZW1Q7L1Q6 419 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 ZNF560Q96MR9 790 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 EIF2AQ9BY44 585 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 FAM8A1Q9UBU6 413 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 SAT1P21673 171 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 NNMTP40261 264 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 C16orf86Q6ZW13 317 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 RNF180Q86T96 592 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 ERO1BQ86YB8 467 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 CEP72Q9P209 647 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 COL3A1P02461 1466 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 PVALEFA0A1B0GWK0 134 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 E9PMD0 336 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 MAGEB2O15479 319 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 BNIP3LO60238 219 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 NR3C2P08235 984 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 ESRRAP11474 423 aaPredicted RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 INPP1P49441 399 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 DARS2Q6PI48 645 aaKnown RBP14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 SCFD2Q8WU76 684 aa14.21□□□□□ -0.13
SMARCA4-216ENST00000591545 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms