RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CIAO1O76071 339 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 T-ENOLP0DO92 83 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 TXKP42681 527 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 SEC23AQ15436 765 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 LRRC37BQ96QE4 947 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 ATXN10Q9UBB4 475 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 RIPK2O43353 540 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 PDE8AO60658 829 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CCNB1P14635 433 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CPA2P48052 419 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 MTA1Q13330 715 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 PPP2R5CQ13362 524 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 DUPD1Q68J44 220 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 RIBC1Q8N443 379 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 DMAP1Q9NPF5 467 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 TXLNGQ9NUQ3 528 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 DDX18Q9NVP1 670 aaKnown RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 TDRKHQ9Y2W6 561 aaKnown RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 NUMBLQ9Y6R0 609 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 HNRNPCP07910 306 aaKnown RBP eCLIP16.3■□□□□ 0.23e-9■■□□□ 12.4
CIRBP-228ENST00000590347 TAF1BQ53T94 588 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 HEATR3Q7Z4Q2 680 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CPNE8Q86YQ8 564 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 HOMEZQ8IX15 550 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CEP72Q9P209 647 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 LRCH1Q9Y2L9 728 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 KIAA0391O15091 583 aaKnown RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 USP1O94782 785 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 SKIP12755 728 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 VHLP40337 213 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 OVGP1Q12889 678 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 Q4G0T1 1027 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 WDR60Q8WVS4 1066 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
CIRBP-228ENST00000590347 HIC2Q96JB3 615 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 AGBL1Q96MI9 1066 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 MIPEPQ99797 713 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 SLITRK6Q9H5Y7 841 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 NAGPAQ9UK23 515 aa16.3■□□□□ 0.2
CIRBP-228ENST00000590347 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 IGSF9BQ9UPX0 1349 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 CCDC160A6NGH7 325 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 PIAS1O75925 651 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 PDE8BO95263 885 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 NUDT17P0C025 328 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 BCAMP50895 628 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 TROAPQ12815 778 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 KYNUQ16719 465 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 ACSBG2Q5FVE4 666 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 PRKAG3Q9UGI9 489 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 AJAP1Q9UKB5 411 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 CCDC188H7C350 402 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 CETPP11597 493 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 NT5DC3Q86UY8 548 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 ALG3Q92685 438 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 PRR11Q96HE9 360 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-228ENST00000590347 GRHL1Q9NZI5 618 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 JAG2Q9Y219 1238 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 ZNF711Q9Y462 761 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
CIRBP-228ENST00000590347 OPHN1O60890 802 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 BAG2O95816 211 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 MTMR2Q13614 643 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 LRRC74BQ6ZQY2 392 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■■■■□ 24.2
CIRBP-228ENST00000590347 CCDC97Q96F63 343 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 ALG13Q9NP73 1137 aaKnown RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.21e-6■■■■■ 49.1
CIRBP-228ENST00000590347 LRP2BPQ9P2M1 347 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 GFPT2O94808 682 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SERPINB3P29508 390 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 TTC27Q6P3X3 843 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms