RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 ELAC1Q9H777 363 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 TFIP11Q9UBB9 837 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 HCSTQ9UBK5 93 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 CDH23Q9H251 3354 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 A0A0U1RQF3 1178 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 TSPAN1O60635 241 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 ZSCAN22P10073 491 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 FAM189BP81408 668 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 MBTD1Q05BQ5 628 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 GPM6BQ13491 265 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 PKP1Q13835 747 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 STK38Q15208 465 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 PTPAQ15257 358 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 SKIV2LQ15477 1246 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 ZBTB8OSQ8IWT0 167 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 DEPTORQ8TB45 409 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 HELQQ8TDG4 1101 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 IFT74Q96LB3 600 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 CLIC6Q96NY7 704 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 FAM105AQ9NUU6 356 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 MTCH2Q9Y6C9 303 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 MICAL3Q7RTP6 2002 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 GBF1Q92538 1859 aa15.54■□□□□ 0.08
SCAMP4-212ENST00000590266 B4GALT5O43286 388 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 HOXA2O43364 376 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 LPXNO60711 386 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 HIP1RO75146 1068 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 PLA2G4BP0C869 781 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 BMPR1AP36894 532 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 TMEM119Q4V9L6 283 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 TJAP1Q5JTD0 557 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 HYIQ5T013 277 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 KIFAP3Q92845 792 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 THEGQ9P2T0 379 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 FBXO2Q9UK22 296 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 INPP5FQ9Y2H2 1132 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 RWDD3Q9Y3V2 267 aa15.53■□□□□ 0.08
SCAMP4-212ENST00000590266 UNC80Q8N2C7 3258 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 CCDC169A6NNP5 214 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 F13A1P00488 732 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 SKIP12755 728 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 ATF7P17544 494 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 PLCG1P19174 1290 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 HOXA11P31270 313 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 NAMPTP43490 491 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 RAB27AP51159 221 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 POU5F1BQ06416 359 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 CLLU1OSQ5K130 101 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 NOTUMQ6P988 496 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 CLP1Q92989 425 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 EPSTI1Q96J88 318 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 CASD1Q96PB1 797 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 C11orf84Q9BUA3 381 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 APOL6Q9BWW8 343 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 EIF2AQ9BY44 585 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 RNF19AQ9NV58 838 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 TYW1Q9NV66 732 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 PCDHB2Q9Y5E7 798 aa15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 SRPRBQ9Y5M8 271 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-212ENST00000590266 NPHP3-ACAD11A0A0J9YXS1 232 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 MEIS3P2A8K0S8 358 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 SFI1A8K8P3 1242 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 H3BNC9 293 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 EOMESO95936 686 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 LINC00271P0C7V0 271 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 ARF4P18085 180 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 TXLNAP40222 546 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 PEX3P56589 373 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 BECN1Q14457 450 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 SLC39A14Q15043 492 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 AMHR2Q16671 573 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 USP49Q70CQ1 688 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 ZNF598Q86UK7 904 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 GPBP1Q86WP2 473 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 LRRC43Q8N309 656 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 SYT2Q8N9I0 419 aaPredicted RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 KRI1Q8N9T8 703 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 ATXN2LQ8WWM7 1075 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 PGBD4Q96DM1 585 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 NFKBIZQ9BYH8 718 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 C2orf40Q9H1Z8 148 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 PRDM6Q9NQX0 595 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 USP20Q9Y2K6 914 aa15.51■□□□□ 0.07
SCAMP4-212ENST00000590266 EVPLQ92817 2033 aa15.5■□□□□ 0.07
SCAMP4-212ENST00000590266 NPTXRO95502 500 aa15.5■□□□□ 0.07
SCAMP4-212ENST00000590266 PRKCBP05771 671 aa15.5■□□□□ 0.07
SCAMP4-212ENST00000590266 KRT18P05783 430 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms