RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 EDN1P05305 212 aa20.24■□□□□ 0.83
DDX39A-212ENST00000590260 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDX39A-212ENST00000590260 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
DDX39A-212ENST00000590260 LPPQ93052 612 aa20.24■□□□□ 0.83
DDX39A-212ENST00000590260 ARHGEF35A5YM69 484 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 TTLL13PA6NNM8 815 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 STX6O43752 255 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 EYA4O95677 639 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 DNAJB1P25685 340 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 KRT79Q5XKE5 535 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 DAW1Q8N136 415 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 MCPH1Q8NEM0 835 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 CCDC43Q96MW1 224 aaKnown RBP20.23■□□□□ 0.83
DDX39A-212ENST00000590260 RUSC1Q9BVN2 902 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 NFKBIZQ9BYH8 718 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 RAB34Q9BZG1 259 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 FAM105AQ9NUU6 356 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 TYW1Q9NV66 732 aaKnown RBP20.23■□□□□ 0.83
DDX39A-212ENST00000590260 LMCD1Q9NZU5 365 aa20.23■□□□□ 0.83
DDX39A-212ENST00000590260 B4GALT5O43286 388 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 RB1P06400 928 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 MAPK7Q13164 816 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 LONRF3Q496Y0 759 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 TMEM119Q4V9L6 283 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 CDCA2Q69YH5 1023 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-212ENST00000590260 TWF2Q6IBS0 349 aaKnown RBP20.22■□□□□ 0.83
DDX39A-212ENST00000590260 RNF169Q8NCN4 708 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 HELQQ8TDG4 1101 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 CPB2Q96IY4 423 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 PLIN2Q99541 437 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 TMEM117Q9H0C3 514 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 DACT1Q9NYF0 836 aa20.22■□□□□ 0.83
DDX39A-212ENST00000590260 GTPBP6O43824 516 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 ZNF623O75123 536 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 EOMESO95936 686 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 ITGB1P05556 798 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 TFDP1Q14186 410 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 AGMOQ6ZNB7 445 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 HSCBQ8IWL3 235 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 KLHL23Q8NBE8 558 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 SMG8Q8ND04 991 aaKnown RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 MRPL38Q96DV4 380 aaKnown RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 USP28Q96RU2 1077 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 EIF2AQ9BY44 585 aaKnown RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 ALG13Q9NP73 1137 aaKnown RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 FBXO2Q9UK22 296 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-212ENST00000590260 PLAGL2Q9UPG8 496 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 STK24Q9Y6E0 443 aa20.21■□□□□ 0.83
DDX39A-212ENST00000590260 INO80B-WBP1J3KQ70 363 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 B4GALT3O60512 393 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 ARF4P18085 180 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-212ENST00000590260 AFF1P51825 1210 aaKnown RBP20.2■□□□□ 0.82
DDX39A-212ENST00000590260 RINT1Q6NUQ1 792 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 C1orf186Q6ZWK4 172 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 MRPL10Q7Z7H8 261 aaKnown RBP20.2■□□□□ 0.82
DDX39A-212ENST00000590260 CDR2LQ86X02 465 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-212ENST00000590260 SPPL3Q8TCT6 385 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 P2RX5Q93086 422 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 KIFC3Q9BVG8 833 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 PLVAPQ9BX97 442 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 RWDD3Q9Y3V2 267 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 PCDHB2Q9Y5E7 798 aa20.2■□□□□ 0.82
DDX39A-212ENST00000590260 LRRIQ4A6NIV6 560 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 PBX3P40426 434 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 PKP1Q13835 747 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 CABP7Q86V35 215 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
DDX39A-212ENST00000590260 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 FZD8Q9H461 694 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 DNM3Q9UQ16 869 aa20.19■□□□□ 0.82
DDX39A-212ENST00000590260 OFD1O75665 1012 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 MARCKSP29966 332 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-212ENST00000590260 IRS1P35568 1242 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 SLC12A3P55017 1021 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 CEBPZQ03701 1054 aaKnown RBP20.18■□□□□ 0.82
DDX39A-212ENST00000590260 ZRSR1Q15695 479 aaKnown RBP20.18■□□□□ 0.82
DDX39A-212ENST00000590260 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 AK8Q96MA6 479 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-212ENST00000590260 PCDHGC5Q9Y5F6 944 aa20.18■□□□□ 0.82
DDX39A-212ENST00000590260 HOXA2O43364 376 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 HIP1RO75146 1068 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 BMP15O95972 392 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 NAMPTP43490 491 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 RAB27AP51159 221 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 TFF2Q03403 129 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 PCBP1Q15365 356 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX39A-212ENST00000590260 FAM187BQ17R55 369 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 ARSHQ5FYA8 562 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 SYT2Q8N9I0 419 aaPredicted RBP20.17■□□□□ 0.82
DDX39A-212ENST00000590260 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 CSRNP2Q9H175 543 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 HES2Q9Y543 173 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms