RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LMAN2LQ9H0V9 348 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 BHMT2Q9H2M3 363 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 POLD4Q9HCU8 107 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
TPM4-212ENST00000590180 RNF19AQ9NV58 838 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 DNM3Q9UQ16 869 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 VWA3AA6NCI4 1184 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 LRRIQ4A6NIV6 560 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 K7ELQ4 463 aaPredicted RBP13.4□□□□□ -0.26
TPM4-212ENST00000590180 ITGB1P05556 798 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
TPM4-212ENST00000590180 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 CAPSQ13938 189 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 CLLU1OSQ5K130 101 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 POF1BQ8WVV4 589 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
TPM4-212ENST00000590180 PGBD4Q96DM1 585 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 TRAIPQ9BWF2 469 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 COL25A1Q9BXS0 654 aaPredicted RBP13.4□□□□□ -0.26
TPM4-212ENST00000590180 NSUN3Q9H649 340 aaKnown RBP13.4□□□□□ -0.26
TPM4-212ENST00000590180 CWH43Q9H720 699 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 AGPAT5Q9NUQ2 364 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 HCSTQ9UBK5 93 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 INPP5FQ9Y2H2 1132 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 BRWD1Q9NSI6 2320 aa13.4□□□□□ -0.26
TPM4-212ENST00000590180 E9PMD0 336 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 ZNF623O75123 536 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
TPM4-212ENST00000590180 LAG3P18627 525 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 LIG1P18858 919 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
TPM4-212ENST00000590180 RAB27AP51159 221 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM4-212ENST00000590180 GLB1LQ6UWU2 654 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
TPM4-212ENST00000590180 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 PLIN2Q99541 437 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 IGFLR1Q9H665 355 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 PUF60Q9UHX1 559 aaKnown RBP13.39□□□□□ -0.27
TPM4-212ENST00000590180 TTC28Q96AY4 2481 aa13.39□□□□□ -0.27
TPM4-212ENST00000590180 A0A0C4DFX4 3053 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 OFD1O75665 1012 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 FGF18O76093 207 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 EYA4O95677 639 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
TPM4-212ENST00000590180 SYT1P21579 422 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 DNAJB1P25685 340 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 AXLP30530 894 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 RNASELQ05823 741 aaKnown RBP13.38□□□□□ -0.27
TPM4-212ENST00000590180 MBTD1Q05BQ5 628 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 CSPP1Q1MSJ5 1256 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
TPM4-212ENST00000590180 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 KCNT2Q6UVM3 1135 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 MRPL10Q7Z7H8 261 aaKnown RBP13.38□□□□□ -0.27
TPM4-212ENST00000590180 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
TPM4-212ENST00000590180 ZBTB8OSQ8IWT0 167 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
TPM4-212ENST00000590180 MRPL9Q9BYD2 267 aaKnown RBP13.38□□□□□ -0.27
TPM4-212ENST00000590180 MEIS3P2A8K0S8 358 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 NCK2O43639 380 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 TSPAN1O60635 241 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 ITGA4P13612 1032 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 KCNA5P22460 613 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 PBX3P40426 434 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 KCNQ1P51787 676 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 KRT17Q04695 432 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 CAMK1Q14012 370 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 PPP2R5AQ15172 486 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 NOMO2Q5JPE7 1267 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 CNNM3Q8NE01 707 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 PPP2R3CQ969Q6 453 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 SNX21Q969T3 373 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 APOL6Q9BWW8 343 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 GBP3Q9H0R5 595 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 UBE2ZQ9H832 354 aaPredicted RBP13.37□□□□□ -0.27
TPM4-212ENST00000590180 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
TPM4-212ENST00000590180 TRANK1O15050 2925 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms