RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 BTBD18B2RXH4 712 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 LOC730098B7Z3J9 87 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 SLITRK3O94933 977 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 YWHABP31946 246 aaKnown RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 KRT2P35908 639 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 HERC4Q5GLZ8 1057 aaPredicted RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 LLGL2Q6P1M3 1020 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 CATSPER4Q7RTX7 472 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 CDCA3Q99618 268 aaPredicted RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 APOL5Q9BWW9 433 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 XPNPEP1Q9NQW7 623 aa20.15■□□□□ 0.82
H3F3B-209ENST00000589949 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
H3F3B-209ENST00000589949 ZNF623O75123 536 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 OFD1O75665 1012 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 SRGAP2CP0DJJ0 459 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 PPM1AP35813 382 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 NEK4P51957 841 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 POLGP54098 1239 aaPredicted RBP20.14■□□□□ 0.81
H3F3B-209ENST00000589949 LAMTOR4Q0VGL1 99 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 UBXN11Q5T124 520 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 ANKRD54Q6NXT1 300 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 TMC7Q7Z402 723 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 MRPL43Q8N983 215 aaKnown RBP20.14■□□□□ 0.81
H3F3B-209ENST00000589949 SLC7A3Q8WY07 619 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 WASF1Q92558 559 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 FAM122AQ96E09 287 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 INO80BQ9C086 356 aaPredicted RBP20.14■□□□□ 0.81
H3F3B-209ENST00000589949 NRDE2Q9H7Z3 1164 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 NGRNQ9NPE2 291 aaKnown RBP20.14■□□□□ 0.81
H3F3B-209ENST00000589949 AGPAT5Q9NUQ2 364 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 TBC1D13Q9NVG8 400 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 HCN4Q9Y3Q4 1203 aa20.14■□□□□ 0.81
H3F3B-209ENST00000589949 A0A087WWV3 80 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 C2orf71A6NGG8 1288 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 RFC5P40937 340 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 TECP42680 631 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 KRT17Q04695 432 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 CBX2Q14781 532 aaPredicted RBP20.13■□□□□ 0.81
H3F3B-209ENST00000589949 EMC2Q15006 297 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 XKR9Q5GH70 373 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 AGMOQ6ZNB7 445 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 ZNF280BQ86YH2 543 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 TPH2Q8IWU9 490 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 NAP1L4Q99733 375 aaKnown RBP20.13■□□□□ 0.81
H3F3B-209ENST00000589949 HSD17B14Q9BPX1 270 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 EIF2AK1Q9BQI3 630 aaKnown RBP20.13■□□□□ 0.81
H3F3B-209ENST00000589949 JPH2Q9BR39 696 aaPredicted RBP20.13■□□□□ 0.81
H3F3B-209ENST00000589949 VN1R3Q9BXE9 311 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 DNAJB4Q9UDY4 337 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 PCDHB2Q9Y5E7 798 aa20.13■□□□□ 0.81
H3F3B-209ENST00000589949 ARID2Q68CP9 1835 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 MARCH6O60337 910 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 ZC3H11AO75152 810 aaKnown RBP eCLIP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 NOMO2Q5JPE7 1267 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 HFE2Q6ZVN8 426 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 FERMT3Q86UX7 667 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 DIS3L2Q8IYB7 885 aaKnown RBP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 SLFN12Q8IYM2 578 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 FEZF2Q8TBJ5 459 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 PSPC1Q8WXF1 523 aaKnown RBP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 PHF7Q9BWX1 381 aaPredicted RBP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 MRPL9Q9BYD2 267 aaKnown RBP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 ARIH1Q9Y4X5 557 aaPredicted RBP20.12■□□□□ 0.81
H3F3B-209ENST00000589949 WDFY4Q6ZS81 3184 aa20.12■□□□□ 0.81
H3F3B-209ENST00000589949 TECTAO75443 2155 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.81
H3F3B-209ENST00000589949 GALTP07902 379 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 ALDH7A1P49419 539 aaKnown RBP20.11■□□□□ 0.81
H3F3B-209ENST00000589949 SRGAP1Q7Z6B7 1085 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 MRPL10Q7Z7H8 261 aaKnown RBP20.11■□□□□ 0.81
H3F3B-209ENST00000589949 RNF149Q8NC42 400 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 RPGRIP1Q96KN7 1286 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 MTMR9Q96QG7 549 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 ZBP1Q9H171 429 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 PPME1Q9Y570 386 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 HCFC2Q9Y5Z7 792 aa20.11■□□□□ 0.81
H3F3B-209ENST00000589949 CLASP2O75122 1294 aaKnown RBP20.1■□□□□ 0.81
H3F3B-209ENST00000589949 DDHD2O94830 711 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
H3F3B-209ENST00000589949 SLC11A1P49279 550 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 RAB27AP51159 221 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 SMC1AQ14683 1233 aaKnown RBP20.1■□□□□ 0.81
H3F3B-209ENST00000589949 CALCRLQ16602 461 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 ERICH6BQ5W0A0 696 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 KANK3Q6NY19 840 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 GLB1LQ6UWU2 654 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 OTUD6AQ7L8S5 288 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 VPS52Q8N1B4 723 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 IGSF21Q96ID5 467 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
H3F3B-209ENST00000589949 PCDHA12Q9UN75 941 aa20.1■□□□□ 0.81
H3F3B-209ENST00000589949 LYPLA2O95372 231 aa20.09■□□□□ 0.81
H3F3B-209ENST00000589949 CXCL14O95715 111 aa20.09■□□□□ 0.81
H3F3B-209ENST00000589949 SKIP12755 728 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms